Query= MSMg01no468_k20.b1 MSMg01no468_k20.b1 CHROMAT_FILE:
MSMg01no468_k20.b1 PHD_FILE: MSMg01no468_k20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:59 2005
(466 letters)
>mm_chr10_93987914_93988779
Length = 866
Score = 775 bits (401), Expect = 0.0
Identities = 423/431 (98%), Gaps = 3/431 (0%)
Strand = Plus / Minus
Query: 5 gaattcctacagatgtcccgaggcaaaaccatccaacaacaggagggggctgaggaggtt 64
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gaattcctacagatggccagaggcaaaaccatccaacaacaggagggggctgaggaggtt 372
Query: 65 tctctttccaagcctcaactcaatccggctgatccagtccaggagaaaggcagggcagag 124
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tctcttttcaagcctcaactcaatccggctgatccagtccaggagaaaggcagggcagag 312
Query: 125 actcccacaaaagccccaccccttgctcacagctcactctgggactgcaggcctcaaatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 actcccacaaaagccccaccccttgctcacagctcactctgggactgcaggcctcaaatt 252
Query: 185 cagacagcacttagcatagtcacggtgacattaaaaa-aa--ataataataataaattga 241
||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 251 cagacagcacttagcatagtcacggtgacattaaaaataataataataataataaattga 192
Query: 242 agacttaaagaataagctgatttagaaatattaagtaaataatagtgctgatggcatcaa 301
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 agacttaaagaatgagctgatttagaaatattaagtaaataatagtgctgatggcatcaa 132
Query: 302 gctgggtgtgggtggcatggggatggctgaagtctgggaaactctgtggtaggccgtgag 361
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 gctgggtgtgggtggcgtggggatggctgaagtctgggaaactctgtggtaggccgtgag 72
Query: 362 tgactcaaccaacacgatacctgtcagcatttttttttctaatgccacttccggtggtgg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tgactcaaccaacacgatacctgtcagcatttttttttctaatgccacttccggtggtgg 12
Query: 422 gtcacacagct 432
|||||||||||
Sbjct: 11 gtcacacagct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no468_k20.g1 MSMg01no468_k20.g1 CHROMAT_FILE:
MSMg01no468_k20.g1 PHD_FILE: MSMg01no468_k20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:59 2005
(380 letters)
>mm_chr10_93793711_93794490
Length = 780
Score = 661 bits (342), Expect = 0.0
Identities = 372/382 (97%), Gaps = 3/382 (0%)
Strand = Plus / Plus
Query: 1 tccgggctagtctcaaattcactaccttgagcatttctttgaaagatttgtatttatgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tccgggctagtctcaaattcactaccttgagcatttctttgaaagatttgtatttatgca 259
Query: 61 cacacgtgttttattatgtttatgtgtgtgctgagtgtaaatcacatgtgtgcaggtgct 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 260 cacacgtgttttattatgtttatgtgtgtgctgagtgcaaatcacatgtgtgcaggtgct 319
Query: 121 cttcgaagccagaagaagatattgtac-cccccccttcccc-agagctgcagttacaggc 178
|||||||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||
Sbjct: 320 cttcgaagccagaagaagatattggacaccccccc-tccccaagagctgcagttacaggc 378
Query: 179 agttgccagctgcctagcatgggtgctgggaactgaactcaggtcttttagaagggctcc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 agttgccagctgcctagcatgggtgctgggaactgaactcaggtcttttagaagggctcc 438
Query: 239 aagtgctgctaaacaaccacttagctatctctccagtccttcttggaagatttgaactct 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aagtgctgctaaacaaccacttagctatctctccagtccttcttggaagatttgaactct 498
Query: 299 ttgccatatccttctgggtagctgggaccttcagccacatagcaccattcctagcaaaat 358
|||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||
Sbjct: 499 ttgccatatccttctgggtagctgggacgttcagccacgtagcaccattcccagcaaaat 558
Query: 359 tcaatttttgtttttaaaaaat 380
||||||||||||||||||||
Sbjct: 559 aaaatttttgtttttaaaaaat 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
