Query= MSMg01no468_n20.b1 MSMg01no468_n20.b1 CHROMAT_FILE:
MSMg01no468_n20.b1 PHD_FILE: MSMg01no468_n20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:14 2005
(478 letters)
>mm_chr10_34078629_34079507
Length = 879
Score = 675 bits (349), Expect = 0.0
Identities = 387/407 (95%), Gaps = 14/407 (3%)
Strand = Plus / Minus
Query: 73 tcatgggataatcaaaaaggaaactggagtaaatgactgaattgatatgtaaataaaagt 132
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 tcatgggataatcaaaaaggaaactggagtaaatgactgaattgatatgtaaataaaaga 816
Query: 133 ctgagccttggttttctagagctgaactgtctggatgagctgtctggatgagctgtctgg 192
|||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 815 ctgagccttggttttctagagctgaact---------a----tctggatgagctgtctgg 769
Query: 193 aaatcttcagaggctgccagctcgttcttcctctactcccgaacaccccttcctcaggac 252
|| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 768 aactctttagaggctgccagctcgttcttcctctactcctgaacaccccttcctcaggac 709
Query: 253 cctctccaagctgaggctggcctttggcatgcatgaatggatgatgtgaagatagaaata 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 cctctccaagctgaggctggcctttggcatgcatgaatggatgatgtgaagatagaaata 649
Query: 313 caaagggataatagaagaggaacagagggaaaggaatatcaaggatatgtgggaaattag 372
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 648 caaagggataatagaagaggaacagagagaaaggaatatcaaggatatgtgggaaattag 589
Query: 373 cttaatgtatatcatatactaatataaaaatacccatgtaacagcaccatgaaacac-ca 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 588 cttaatgtatatcatatactaatataaaaatacccatgtaacagcaccatgaaacacaca 529
Query: 432 ttgaaaactttttaaaattaaaaatacataaagtcagcttcatttaa 478
||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 528 ttgaaaacttttttaaattaaaaatacataaagtcagcttcatttaa 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 879
Length adjustment: 10
Effective length of query: 468
Effective length of database: 869
Effective search space: 406692
Effective search space used: 406692
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no468_n20.g1 MSMg01no468_n20.g1 CHROMAT_FILE:
MSMg01no468_n20.g1 PHD_FILE: MSMg01no468_n20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:14 2005
(245 letters)
>mm_chr10_33869852_33870497
Length = 646
Score = 445 bits (230), Expect = e-129
Identities = 242/246 (98%), Gaps = 1/246 (0%)
Strand = Plus / Plus
Query: 1 cactattcactagaagtgggaaacccttaacatatttttttt-taattacttcaaaaaag 59
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 cactattcactagaagtgggaaacccttaacatattttttttaaaattacttcaaaaaag 260
Query: 60 gaggtcatgttctggttaaagaggatcatgcaatgatgattaatgcattatctagcctga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaggtcatgttctggttaaagaggatcatgcaatgatgattaatgcattatctagcctga 320
Query: 120 acctaattggttgctaatttaaaaggaaagctagatttggctcacacttggactttccat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acctaattggttgctaatttaaaaggaaagctagatttggctcacacttggactttccat 380
Query: 180 ctttgctataaaccatgctcatgttttggagctgaggtcaggttttcttccttcgtaacc 239
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 381 ctttgctataaaccatgctcatgttttggagttgaggtcaggttttcttcctttgtaacc 440
Query: 240 tcaaag 245
||||||
Sbjct: 441 tcaaag 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 646
Length adjustment: 9
Effective length of query: 236
Effective length of database: 637
Effective search space: 150332
Effective search space used: 150332
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
