Query= MSMg01no468_o21.b1 MSMg01no468_o21.b1 CHROMAT_FILE:
MSMg01no468_o21.b1 PHD_FILE: MSMg01no468_o21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:19 2005
(219 letters)
>mm_chr10_86458803_86459421
Length = 619
Score = 408 bits (211), Expect = e-118
Identities = 217/219 (99%)
Strand = Plus / Minus
Query: 1 cacatcctatagacccagtactcaggaggctgaggcaggacaatcatcatttcaaggcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 cacatcctatagacccagtactcaggaggctgaggcaggacaatcatcatttcaaggcca 471
Query: 61 acctggcctgcaaagcaaatttcagaccaacctaagctaaattgcaagagtcagaggaaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 470 acctggcctgcaaagcaaatttcagaccaacctaagctaaattgcaagagccagaggaaa 411
Query: 121 aaggagaggttgaaagaataaaagaaagatcttttctaagtcacaaaaagatacaattga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 aaggagaggttgaaagaataaaagaaagatcttttctaagtcacaaaaagatacaattga 351
Query: 181 aatacatgtgtatcaaggaggggtgtgtgtgtgtgtgtg 219
|||||||||||||||||||||||||||| ||||||||||
Sbjct: 350 aatacatgtgtatcaaggaggggtgtgtctgtgtgtgtg 312
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 219
Length of database: 619
Length adjustment: 9
Effective length of query: 210
Effective length of database: 610
Effective search space: 128100
Effective search space used: 128100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no468_o21.g1 MSMg01no468_o21.g1 CHROMAT_FILE:
MSMg01no468_o21.g1 PHD_FILE: MSMg01no468_o21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:20 2005
(399 letters)
>mm_chr10_86291933_86292731
Length = 799
Score = 748 bits (387), Expect = 0.0
Identities = 397/401 (99%), Gaps = 3/401 (0%)
Strand = Plus / Plus
Query: 1 agtgggcactgaatgaacacaggcacgcatgcatgcacacatgctcaagcacacacacac 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 199 agtgggcactgaatgaacacaggcacacatgcatgcacacatgctcaagcacacacacac 258
Query: 61 acacacacacacacacacacacacacacacacacacaca--tctcttccccttccccata 118
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 259 acacacacacacacacacacacacacacacacacacacacatctcttccccttccccata 318
Query: 119 ttttgcatgtctagaagttccttgaggtaccctatggattttagctctagagtctgtggt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttttgcatgtctagaagttccttgaggtaccctatggattttagctctagagtctgtggt 378
Query: 179 gggtaatttgttaatgtaaaatgtggacaccagggctgtagagatggttcaggagttaag 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gggtaatttgttaatgtaaaatgtggacaccagggctgtagagatggttcaggagttaag 438
Query: 239 agcactggctgttcttgcagaggtctcaggttaattcctagcacccacatgacatctgta 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 agcactggctgttcttgcagaggtctcaggttaattcctagcacccacatgacatctgta 498
Query: 299 attatagtccctgggtatctgatgccctcttctggtcaccataggcactacatgcatgtg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 attatagtccctgggtatctgatgccctcttctggtcaccataggcactacatgcatgtg 558
Query: 359 ataggcacagacatacctgcaggcaaaacacccatgcacgt 399
|||||||||||||||| ||||||||||||||||||||||||
Sbjct: 559 ataggcacagacatac-tgcaggcaaaacacccatgcacgt 598
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
