Query= MSMg01no473_b20.b1 MSMg01no473_b20.b1 CHROMAT_FILE:
MSMg01no473_b20.b1 PHD_FILE: MSMg01no473_b20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:01 2005
(545 letters)
>mm_chr10_5667383_5668327
Length = 945
Score = 1031 bits (533), Expect = 0.0
Identities = 542/545 (99%)
Strand = Plus / Minus
Query: 1 taaggttaagtttatttgcaaatgggaaatccttcttcttggtaaccttaaagactggtt 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 745 taaggttaagtttatttgcaaatgggaaatccttcttcttggtaatcttaaagactggtt 686
Query: 61 agtatactcagtgctctccccaaagcttgtaccacccccttcctcaatagcctcctgttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agtatactcagtgctctccccaaagcttgtaccacccccttcctcaatagcctcctgttc 626
Query: 121 acaagaagagagatcagttagtgtgcacgtcagcacacacacaacaaagccgaattgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acaagaagagagatcagttagtgtgcacgtcagcacacacacaacaaagccgaattgttt 566
Query: 181 ttgacaattagaaattcagctcacaaagcagatgttccagatgtggcgtgcagcaggcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttgacaattagaaattcagctcacaaagcagatgttccagatgtggcgtgcagcaggcta 506
Query: 241 gaatctctggcttattgatccgttgacttaatgttatcaaagctctgggttgctttcagc 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaatctctggctgattgatccgttgacttaatgttatcaaagctctgggttgctttcagc 446
Query: 301 tttctactctgctgtgttccctgtatctattgtatcccaggtggggccaccacactgtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttctactctgctgtgttccctgtatctattgtatcccaggtggggccaccacactgtca 386
Query: 361 taggatgtccccaccagtctctagaaacatggttttggttcacgttcacaagaggacatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taggatgtccccaccagtctctagaaacatggttttggttcacgttcacaagaggacatg 326
Query: 421 attaagttgcaaaaagcatgggatgttagtagtcccatttggtctgatgaattcagctaa 480
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attaagttgcaaaaagcacgggatgttagtagtcccatttggtctgatgaattcagctaa 266
Query: 481 agtgaagttctcatccctggaccaaataatggtctggatatatcagagtctccatctgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agtgaagttctcatccctggaccaaataatggtctggatatatcagagtctccatctgaa 206
Query: 541 gactt 545
|||||
Sbjct: 205 gactt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no473_b20.g1 MSMg01no473_b20.g1 CHROMAT_FILE:
MSMg01no473_b20.g1 PHD_FILE: MSMg01no473_b20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:01 2005
(480 letters)
>mm_chr10_5467433_5468312
Length = 880
Score = 928 bits (480), Expect = 0.0
Identities = 480/480 (100%)
Strand = Plus / Plus
Query: 1 aataaaacttttgtctcacaccatatacaaaaatcgatgcaaaatggagtaaagacagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aataaaacttttgtctcacaccatatacaaaaatcgatgcaaaatggagtaaagacagaa 260
Query: 61 ataataaaaaactaccaaaagaaatgctggtgtaggcaagaacttctgggacataacatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataataaaaaactaccaaaagaaatgctggtgtaggcaagaacttctgggacataacatt 320
Query: 121 gaagcattaagtactgcatcaaatttaaaagcttcctcattgcaaatgaaatacagaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagcattaagtactgcatcaaatttaaaagcttcctcattgcaaatgaaatacagaggt 380
Query: 181 taagaggcagcccaagagtgtgggagaatatatgcaaacctcaaatctagtaagaaattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taagaggcagcccaagagtgtgggagaatatatgcaaacctcaaatctagtaagaaattg 440
Query: 241 acagaatacatattatgtattcacatatggggagattaaatgcttaaatatcaagaaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagaatacatattatgtattcacatatggggagattaaatgcttaaatatcaagaaaat 500
Query: 301 aaacaactaggcaaaggatatgaatactcttgctctctggaaaatcatgctctgtgctaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaacaactaggcaaaggatatgaatactcttgctctctggaaaatcatgctctgtgctaa 560
Query: 361 cttgtcctttgggattccaagcacattcgaaaaggaatggagaacaaaaccgcaaaccag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttgtcctttgggattccaagcacattcgaaaaggaatggagaacaaaaccgcaaaccag 620
Query: 421 tctgcaacctaaatggtgccttcattccagccttgcctttagttccatcaaacaagaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctgcaacctaaatggtgccttcattccagccttgcctttagttccatcaaacaagaaga 680
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
