Query= MSMg01no474_a12.b1 MSMg01no474_a12.b1 CHROMAT_FILE:
MSMg01no474_a12.b1 PHD_FILE: MSMg01no474_a12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:20 2005
(477 letters)
>mm_chr10_80374235_80375111
Length = 877
Score = 263 bits (136), Expect = 2e-74
Identities = 136/136 (100%)
Strand = Plus / Plus
Query: 342 gggtgtataagctcaacacacatcagggctcagagacctggtatctgtcagcacagagat 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gggtgtataagctcaacacacatcagggctcagagacctggtatctgtcagcacagagat 391
Query: 402 ggtggctgcccagcatgggcctggcaggtcagccaaggccagagtagaagggctgctgag 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ggtggctgcccagcatgggcctggcaggtcagccaaggccagagtagaagggctgctgag 451
Query: 462 ggtcttctgcaggtgg 477
||||||||||||||||
Sbjct: 452 ggtcttctgcaggtgg 467
Score = 232 bits (120), Expect = 4e-65
Identities = 129/132 (97%)
Strand = Plus / Plus
Query: 1 tgtgctaccttctgcccacgagctgcaacactgcccaaccctgaacatgagtgagactct 60
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgctaccatctgcccatgagctgcaacactgcccaaccctgaacatgagtgagactct 260
Query: 61 gatgtgacagtgtggaaggacctagaagacatggtgctcaatgatactcagatgcaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatgtgacagtgtggaaggacctagaagacatggtgctcaatgatactcagatgcaaagt 320
Query: 121 ccacttggtgtg 132
||||| ||||||
Sbjct: 321 ccactcggtgtg 332
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no474_a12.g1 MSMg01no474_a12.g1 CHROMAT_FILE:
MSMg01no474_a12.g1 PHD_FILE: MSMg01no474_a12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:20 2005
(239 letters)
>mm_chr10_80555235_80555867
Length = 633
Score = 424 bits (219), Expect = e-123
Identities = 230/237 (97%), Gaps = 6/237 (2%)
Strand = Plus / Minus
Query: 1 tccatgcacctatggtcgctatttttctctgtcacaagagctggcaacctacccaaggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tccatgcacctatggtcgctatttttctctgtcacaagagctggcaacctacccaaggac 372
Query: 61 cctgggttttgctggagatccaacatccggtgacggtgacgctagacagaaacagtagct 120
||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 371 cctgggttttgctggagatccaacatc------cggtgacgctagacagaaacagtagct 318
Query: 121 gtaagtaggggagaggtcacacagacccgacaccccagactttgctctttgctccctgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gtaagtaggggagaggtcacacagacccgacaccccagactttgctctttgctccctgga 258
Query: 181 aaaagcacaaaacagaaagataacagtcgtcccaccctccccctgccatggccactc 237
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 257 aaaagcacaaaacagaaagataacagtcgtcccaccctccccctgccacggccactc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 633
Length adjustment: 9
Effective length of query: 230
Effective length of database: 624
Effective search space: 143520
Effective search space used: 143520
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
