Query= MSMg01no478_m05.b1 MSMg01no478_m05.b1 CHROMAT_FILE:
MSMg01no478_m05.b1 PHD_FILE: MSMg01no478_m05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:33 2005
(413 letters)
>mm_chr10_84936966_84937775
Length = 810
Score = 735 bits (380), Expect = 0.0
Identities = 404/414 (97%), Gaps = 5/414 (1%)
Strand = Plus / Plus
Query: 1 tggacatagtggtgcataatcctaaccattccaggagtggtgggaggaagatcagaagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggacatagtggtgcataatcctaaccattccaggagtggtgggaggaagatcagaagtt 260
Query: 61 caaggtcacccttggcttcatagaatgaggccagcctggactacatacataaataaatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaggtcacccttggcttcatagaatgaggccagcctggactacatacataaataaatac 320
Query: 121 ccagtatacacaaaataatcaatatagggaggtaccaacctctgcctccttccttctttc 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 ccagtatacacaaaataatcaatatagggaggtaccaacctctgcctcctcccttctttc 380
Query: 181 tactgagcacctgtcaggagctggactcaacctgtttctgttagtcggtcgtggacatca 240
||||||||||||||||||||||||||||||| |||||||||||| ||||| |||| |
Sbjct: 381 tactgagcacctgtcaggagctggactcaacatgtttctgttagccggtcctgga----a 436
Query: 241 -agctatctgggctcttcctttgcttctctagcacaggagacatcagaaaagagcaggaa 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gagctatctgggctcttcctttgcttctctagcacaggagacatcagaaaagagcaggaa 496
Query: 300 tgcttaaggtcctgtaaccctgtgaagaacagtggtgccaatctgccagagcttcattag 359
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 497 tgcttaaggtcctgtaaccctgtgaagaacagtggtgccaacctgccagagcttcattag 556
Query: 360 gtgtttgtgttgtgaagccaacatctgaccctgatgcttcgtacccttactcga 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gtgtttgtgttgtgaagccaacatctgaccctgatgcttcgtacccttactcga 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 810
Length adjustment: 9
Effective length of query: 404
Effective length of database: 801
Effective search space: 323604
Effective search space used: 323604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_m05.g1 MSMg01no478_m05.g1 CHROMAT_FILE:
MSMg01no478_m05.g1 PHD_FILE: MSMg01no478_m05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:33 2005
(597 letters)
>mm_chr10_85115274_85116271
Length = 998
Score = 1073 bits (555), Expect = 0.0
Identities = 588/599 (98%), Gaps = 2/599 (0%)
Strand = Plus / Minus
Query: 1 atttccctacataaaatctctcagtgaatcggctctgcggatgctgggcaggtgaacatg 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 633 atttccctacataaaatctctcagtgaatcggctctgcagatgctgggcaggtgaacatg 574
Query: 61 tccctatcctgggaagacagcacattccaactccacagaacttgggttctgagctggctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tccctatcctgggaagacagcacattccaactccacagaacttgggttctgagctggctg 514
Query: 121 tgtggaccctctcctgcctatttatccagcctcttgatcacagtctctctaacaaactag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tgtggaccctctcctgcctatttatccagcctcttgatcacagtctctctaacaaactag 454
Query: 181 tacatgtagtcagtgcggaaagaaaaatgtaaaatgtttgtaaaggcaaccaggtcctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tacatgtagtcagtgcggaaagaaaaatgtaaaatgtttgtaaaggcaaccaggtcctgt 394
Query: 241 ggattatattatgagaagaggggtccagagagcggagtctctctggtgagggtggggt-g 299
||| | | |||||||||||||||||||||||||||||||||||||| ||| ||||| |
Sbjct: 393 ggaggacaagatgagaagaggggtccagagagcggagtctctctggtgggggcggggtgg 334
Query: 300 gggagggtaagcagagtatggagataggacaaactgggcacttaggatggcagagcccta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gggagggtaagcagagtatggagataggacaaactgggcacttaggatggcagagcccta 274
Query: 360 caactctctccttggccaaaggtgcctaagaatcttctaaaacagatgtttgtcaaatcc 419
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 caactttctccttggccaaaggtgcctaagaatcttctaaaacagatgtttgtcaaatcc 214
Query: 420 tcctagaccatggccatttccaggagagaaatcagaagccagctaggtcaaataaattgc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 tcctagaccatggccatttccaggagagaaatcagaagccagctaggtcaaataaattgc 154
Query: 480 ccaaggccccacagattagacatggcagagcccttatgtaacccagagtttgggctgaag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 ccaaggccccacagattagacatggcagagcccttatgtaacccagagtttgggctgaag 94
Query: 540 ggcactggcactaaacttctagcttttttttt-ccccgagacagggtttctctgtatag 597
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 93 ggcactggcactaaacttctagctttttttttcccccgagacagggtttctctgtatag 35
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 998
Length adjustment: 10
Effective length of query: 587
Effective length of database: 988
Effective search space: 579956
Effective search space used: 579956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
