Query= MSMg01no479_d10.b1 MSMg01no479_d10.b1 CHROMAT_FILE:
MSMg01no479_d10.b1 PHD_FILE: MSMg01no479_d10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:07 2005
(702 letters)
>mm_chr10_105186661_105187762
Length = 1102
Score = 1187 bits (614), Expect = 0.0
Identities = 668/686 (97%), Gaps = 3/686 (0%)
Strand = Plus / Minus
Query: 19 attactaaaatagccaggcagtggtggcgcacgcctttaatcccagcactctggaggcag 78
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 1080 attactaaaatagccaggcagtggtggtgcacgcctttaatcccagcactctggagacag 1021
Query: 79 aggcaggcagatttctgagttcgaagccagcctggtctacaaagtgagttccaggacagc 138
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 1020 aggcaggcagatttctgagtttgaggccagcctggtctacaaagtgagttccaggacagc 961
Query: 139 cagggctacacagagaaaccctgtctc-aaaaaacataaataaataaataataaattact 197
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 960 cagggctacacagagaaaccctgtctcaaaaaaacataaataaataaataataaattact 901
Query: 198 aaaaagaagcctaacgatattggtaattattaaaaactaaatattttggcgctttacatg 257
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 900 aaaaagaagcctaacgatattggtaattattaaaaactaaatattttggtgctttacatg 841
Query: 258 tattctagggccacgtataaatgtgaaaggttttgtgaacagagaagcttgaaaagtcta 317
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 tattctagggccacataaaaatgtgaaaggttttgtgaacagagaagcttgaaaagtcta 781
Query: 318 aggca-tttttcaaaagagcagtcactgtaacctcagctttagtggtacatgaactcaac 376
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 aggcattttttcaaaagagcagtcactgtaacctcagctttagtggtacatgaactcaac 721
Query: 377 ttcactgttcatgctatgacctcaacttcagtgttatatgctgcaaccacaactttaagt 436
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 720 ttcactgttcatgctatgacctcaacttcagtgttatatgctgcaaccacaac-ttaagt 662
Query: 437 gtgacatgctatattacttggttatcaatactaatctgtatttcatggaccaaccctatc 496
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gttacatgctatattacttggttatcaatactaatctgtatttcatggaccaaccctatc 602
Query: 497 agtatctctagaggcctgacttcagaatctggtcggtcagactcatcgtttcaaggagct 556
||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||
Sbjct: 601 agtatctctagaggcctgacttcagaagctgctcggtcagactcattgtttcaaggagct 542
Query: 557 ccccgtgtgtcgctccccgtgtgtcgctccccgtgtgttgctccccgtgtgtccagtatt 616
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 541 ccccgtgtgtcgctccccgtgtgtcgctccccatgtgtcgctccccgtgtgtccagtatt 482
Query: 617 tgaggagcacagacttaacgaagctctctgagaaagtttcatgcttggcagaaagggtcc 676
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 481 tgaggagcacagacttaacgaagctctctgagaaagtttcatgctcggcagaaagggtcc 422
Query: 677 tatatggatctgtagtgtctgtctgt 702
|||||||||||||||||||| |||||
Sbjct: 421 tatatggatctgtagtgtctatctgt 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 702
Length of database: 1102
Length adjustment: 10
Effective length of query: 692
Effective length of database: 1092
Effective search space: 755664
Effective search space used: 755664
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no479_d10.g1 MSMg01no479_d10.g1 CHROMAT_FILE:
MSMg01no479_d10.g1 PHD_FILE: MSMg01no479_d10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:08 2005
(429 letters)
>mm_chr10_105016542_105017370
Length = 829
Score = 822 bits (425), Expect = 0.0
Identities = 428/429 (99%)
Strand = Plus / Plus
Query: 1 ggtttagtcaacagcccatggtcttgtagcctctaagtagtgacactaatatttgtaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggtttagtcaacagcccatggtcttgtagcctctaagtagtgacactaatatttgtaagt 260
Query: 61 cacaaagtctctgttttggtcattcctcaatagagtcttgatacccattctcccgttcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacaaagtctctgttttggtcattcctcaatagagtcttgatacccattctcccgttcag 320
Query: 121 gagtcacacttttcttagcatcaagggaaggaactacagatagccatgatgctctaagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 gagtcacacttttcttagcatcaagggaaggaactacagatagccatgatgctttaagta 380
Query: 181 tatttaatgttctacctctcctacatttccacagttctttttggataaattactgtgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatttaatgttctacctctcctacatttccacagttctttttggataaattactgtgaat 440
Query: 241 atttttatttttgtgaatgtcatttttaaagccacttttgtctcactcttccacaatcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atttttatttttgtgaatgtcatttttaaagccacttttgtctcactcttccacaatcta 500
Query: 301 atgcagaaacttttaaaagactctacataatcccagaatccatgctatctataaaaggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgcagaaacttttaaaagactctacataatcccagaatccatgctatctataaaaggat 560
Query: 361 tatatgttatcctatgtataaaaaattatagatttgtacctaagatgtatttaaccaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatatgttatcctatgtataaaaaattatagatttgtacctaagatgtatttaaccaatc 620
Query: 421 tattatgaa 429
|||||||||
Sbjct: 621 tattatgaa 629
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
