Query= MSMg01no482_p10.b1 MSMg01no482_p10.b1 CHROMAT_FILE:
MSMg01no482_p10.b1 PHD_FILE: MSMg01no482_p10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:59 2005
(607 letters)
>mm_chr10_49507948_49508954
Length = 1007
Score = 1158 bits (599), Expect = 0.0
Identities = 605/607 (99%)
Strand = Plus / Minus
Query: 1 attctctttctggagttcttgaaataaagagtgcaccgtgctcttgggtgggcctgggtg 60
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 attctctccctggagttcttgaaataaagagtgcaccgtgctcttgggtgggcctgggtg 748
Query: 61 ccctggagctagtaacagcagcggggaaagaagcgcggcgcctttaaagcaagaggagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ccctggagctagtaacagcagcggggaaagaagcgcggcgcctttaaagcaagaggagag 688
Query: 121 gaacccccgccaggaggcgtgtctgtctccagcgccaccgctgcggctccgcggtctcgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gaacccccgccaggaggcgtgtctgtctccagcgccaccgctgcggctccgcggtctcgg 628
Query: 181 tctccgccgccgtcacttgcgctctcgctggcggctgcgtggccgaggctgggagcccgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tctccgccgccgtcacttgcgctctcgctggcggctgcgtggccgaggctgggagcccgg 568
Query: 241 gacttcccgctgaaccgcctcctgccgcagctctgagaggactaccccagtccctaccct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gacttcccgctgaaccgcctcctgccgcagctctgagaggactaccccagtccctaccct 508
Query: 301 ccctcttcaccctagccgcaggtaagcactcgccagcggtggaccctccctggagctcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ccctcttcaccctagccgcaggtaagcactcgccagcggtggaccctccctggagctcaa 448
Query: 361 tcccagggcgttcgctgtgggtccggaggcactgcggacccgcgaggagcactagccgcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tcccagggcgttcgctgtgggtccggaggcactgcggacccgcgaggagcactagccgcg 388
Query: 421 gacaggaaaggaagaggggaaccgctgcccggctgagttcgtgcgctccaggcacctgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gacaggaaaggaagaggggaaccgctgcccggctgagttcgtgcgctccaggcacctgct 328
Query: 481 ggatgcagccgcttggagggctttgtctcacttgctgcagccagtgccccgcaaggatga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ggatgcagccgcttggagggctttgtctcacttgctgcagccagtgccccgcaaggatga 268
Query: 541 aagtggctcatttggctcctggctggtgttctccacgtaaaatatttgaataagtcgatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aagtggctcatttggctcctggctggtgttctccacgtaaaatatttgaataagtcgatc 208
Query: 601 tgtcaga 607
|||||||
Sbjct: 207 tgtcaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_p10.g1 MSMg01no482_p10.g1 CHROMAT_FILE:
MSMg01no482_p10.g1 PHD_FILE: MSMg01no482_p10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:59 2005
(666 letters)
>mm_chr10_49347069_49348137
Length = 1069
Score = 1212 bits (627), Expect = 0.0
Identities = 658/677 (97%), Gaps = 17/677 (2%)
Strand = Plus / Plus
Query: 1 tcacaaataccatttcttctgtgcaatcacctttattctctgctctacaatttgttcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcacaaataccatttcttctgtgcaatcacctttattctctgctctacaatttgttcctt 260
Query: 61 atgctgtgttgtgagcacagaggatatgaaactgggtttggctatttagaatgaagtgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgctgtgttgtgagcacagaggatatgaaactgggtttggctatttagaatgaagtgat 320
Query: 121 gacctttccaagaacaattttattgtggtattgcaggcagcagccaaaaaaataaaggat 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacctttgcaagaacaattttattgtggtattgcaggcagcagccaaaaaaataaaggat 380
Query: 181 taaaaacaggagtgggtggtagttagacagaaaatctgtgttcagagttagctgctgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaaacaggagtgggtggtagttagacagaaaatctgtgttcagagttagctgctgaag 440
Query: 241 gcagatttttt------atgagatagtgactttaagagaacacaaccaaagcatgaggta 294
||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcaga------ggacagatgagatagtgactttaagagaacacaaccaaagcatgaggta 494
Query: 295 aagaattaaaggtgaactatatgttggaaaaatttatcagctgagagaaaatatttaaga 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aagaattaaaggtgaactatatgttggaaaaatttatcagctgagagaaaatatttaaga 554
Query: 355 tatgaaatagtggatataattgtgtggcagagaaagttaaagaagagtgataaatataac 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tatgaaatagtggatataattgtgtggcagagaaagttaaagaagagtgataaatataac 614
Query: 415 taaaagaaggagggaaattttctctaagactgaaaaag---gagatgttagtacagaaaa 471
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 615 taaaagaaggagggaaattttctctaagactgaaaaagaaggagatgttagtacagaaag 674
Query: 472 agttgtttagatggaaaatcgaagatactttatattgattgtcttctgtaactaagttgt 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 agttgtttagatggaaaatcgaagatactttatattgattgtcttctgtaactaagttgt 734
Query: 532 gattattttgttgaatgatcatatgaattaaaagaacataaaacgttggaatgaataata 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gattattttgttgaatgatcatatgaattaaaagaacataaaacgttggaatgaataata 794
Query: 592 gaggaaaactgtatgactagaaaattagaaaaccaaagccctcatgcaactaaactgaaa 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 gaggaaaactgtatgactagaaaattagaaaaccaaagccctcatgcaactaaactgaaa 854
Query: 652 aaaaaacaca--tataa 666
|||||||||| |||||
Sbjct: 855 aaaaaacacacatataa 871
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1069
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1059
Effective search space: 694704
Effective search space used: 694704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
