Query= MSMg01no485_d09.b1 MSMg01no485_d09.b1 CHROMAT_FILE:
MSMg01no485_d09.b1 PHD_FILE: MSMg01no485_d09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:04 2005
(599 letters)
>mm_chr10_63472258_63473256
Length = 999
Score = 1075 bits (556), Expect = 0.0
Identities = 586/596 (98%)
Strand = Plus / Plus
Query: 4 gaattctagattttgcccattaatcttcacactggcacctgcatatacacaaatgtccag 63
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctagatttggctcattaatcttcacactggcacctgcatatacacaaatgtccag 263
Query: 64 gtttttcatatatcagtgaggcatttagtagacatgtgttgtgcaaactgactagaaata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtttttcatatatcagtgaggcatttagtagacatgtgttgtgcaaactgactagaaata 323
Query: 124 ccttgtgtttacccagatagttggatggcaaactataagaaatataaaattcatacacag 183
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 324 ccttgtgtttacccagatagttggatggcatactataagaaatataaaattcatacacag 383
Query: 184 tggcattgccgagcttattgagtggctatttttattttccatgttctctcaaactccact 243
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tggcatcgccgagcttattgagtggctatttttattttccatgttctctcaaactccact 443
Query: 244 gccaacatcaaagaggcaaagaacagatgagaagatatgctgtctttaaggagtaagcca 303
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 444 gccaacatcaaagaggcaaagaacagaggagaagatatgctgtctttaaggagtaagcca 503
Query: 304 acttacaacttggctggtccaaaaacgaccaggttcataaagtttacattaaatcaaggt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acttacaacttggctggtccaaaaacgaccaggttcataaagtttacattaaatcaaggt 563
Query: 364 catgggggaaacggaacacagggtctctgacctccatcagcagtgtgtgcatttaactga 423
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 564 catgggggaaacggaacacagtgtctctgacttccatcagcagtgtgtgcatttaactga 623
Query: 424 atgtatttcaggctcttagagcaagtagaacttggctccagaatggagcataagacaaac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atgtatttcaggctcttagagcaagtagaacttggctccagaatggagcataagacaaac 683
Query: 484 agagatgatctccatagagatcccaccccacacaatagaatgccagagaggggaagcctt 543
||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 684 agagatgatctccatggagaccccaccccacacgatagaatgccagagaggggaagcctt 743
Query: 544 agaggcatactctgtcaactgtttctttccgttgtctcccgtctagtctctaatgc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 agaggcatactctgtcaactgtttctttccgttgtctcccgtctagtctctaatgc 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no485_d09.g1 MSMg01no485_d09.g1 CHROMAT_FILE:
MSMg01no485_d09.g1 PHD_FILE: MSMg01no485_d09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:04 2005
(592 letters)
>mm_chr10_63610228_63611225
Length = 998
Score = 1106 bits (572), Expect = 0.0
Identities = 589/598 (98%), Gaps = 6/598 (1%)
Strand = Plus / Minus
Query: 1 cactctgccatttgtaaatcggagatgacaccattgtgcaggtgaactgaacaatccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 cactctgccatttgtaaatcggagatgacaccattgtgcaggtgaactgaacaatccaca 739
Query: 61 ccagcgttagtgtttatgtcctgggtgccattctctatgggtgtaacttggccttagagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ccagcgttagtgtttatgtcctgggtgccattctctatgggtgtaacttggccttagagg 679
Query: 121 atgaaaatccagaccagctaaagccacaatgccttgtctcttttgtgttctgtgagatgc 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 678 atgaaaatccagaccagctaaagccacgatgccttgtctcttttgtgttctgtgagatgc 619
Query: 181 ctgttctagccatgcccatcagtgggaacacatcaagagtatcagtagacaaaataaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ctgttctagccatgcccatcagtgggaacacatcaagagtatcagtagacaaaataaaca 559
Query: 241 caacgctctgaacatgagctacgattcagccctgtctttttgaagtcaatatttttgagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 caacgctctgaacatgagctacgattcagccctgtctttttgaagtcaatatttttgagc 499
Query: 301 gtggaaatgtgcatttacatttcaaaagagtagttcagattctcc------gtctctcca 354
||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 498 gtggaaatgtgcatttacatttcaaaagagtagttcagattctccttctccgtctctcca 439
Query: 355 cactcccaccacacaccaatttctcactgttggagatcaagccaaggcattatcaaacag 414
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 438 cactcccaccacacaccaatttctcactgttggaaatcaagccaaggcattatcaaacag 379
Query: 415 tcttttaattctgtaagaagagtgacacgttttaaaatagtctgcagtttgggatttgaa 474
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 378 tcttttaattctgtaagaagagtgacacgctttaaaatagtctgcagtttgggatttgaa 319
Query: 475 agttaatatgtagtacctgtactcactaagaactgaatctcctcaataaagtgaaaatat 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 agttaatatgtagtacctgtactcactaagaactgaatctcctcaataaagtgaaaatat 259
Query: 535 tgagagtttatgataacaatggtcattaacggttctccctaacaggcttctgtattca 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tgagagtttatgataacaatggtcattaacggttctccctaacaggcttctgtattca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 998
Length adjustment: 10
Effective length of query: 582
Effective length of database: 988
Effective search space: 575016
Effective search space used: 575016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
