Query= MSMg01no486_g24.b1 MSMg01no486_g24.b1 CHROMAT_FILE:
MSMg01no486_g24.b1 PHD_FILE: MSMg01no486_g24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:45 2005
(465 letters)
>mm_chr10_6686220_6687084
Length = 865
Score = 862 bits (446), Expect = 0.0
Identities = 461/466 (98%), Gaps = 2/466 (0%)
Strand = Plus / Plus
Query: 1 aattctatactaca-tcgcccatgggctcacaagcaatttccatttttcctttagagata 59
|||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattctatactacaat-gaccatgggctcacaagcaatttccatttttcctttagagata 259
Query: 60 cagttattggcttcttccatctcttcttttctcctcattcattgtacaactgtacacaaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cagttattggcttcttccatctcttcttttctcctcattcattgtacaactgtacacaaa 319
Query: 120 gagccagggagaacaaagaaggaagtggtcaggtctcctggcagggcaagtgttgttatc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gagccagggagaacaaagaaggaagtggtcaggtctcctggcagggcaagtgttgttatc 379
Query: 180 tgaaggctgctctagatgctttgtcatattgcatttgggaataatatttcaacccaagat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgaaggctgctctagatgctttgtcatattgcatttgggaataatatttcaacccaagat 439
Query: 240 aaaaagaatgaggggaagtcctggaatttgaaatacaataactatcataatctgctttgt 299
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 440 aaaaagaatgagggggagtcctggaatttgaaatacaataactatcatagtctgctttgt 499
Query: 300 tttactataatggaatacctcagaatgggtactttataaagaaatgaggtttattcagct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttactataatggaatacctcagaatgggtactttataaagaaatgaggtttattcagct 559
Query: 360 cacatcctagaggtttgtaggcttaaggtcaaggggttatatctagtgaatgtcttcttg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cacatcctagaggtttgtaggcttaaggtcaaggggttatatctagtgaatgtcttcttg 619
Query: 420 ttaacaaagtaggtagctcatcatttgctgagaggggcacacaaga 465
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttaacaaagtaggtagctcatcatttgctgagaggggcacacaaga 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no486_g24.g1 MSMg01no486_g24.g1 CHROMAT_FILE:
MSMg01no486_g24.g1 PHD_FILE: MSMg01no486_g24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:45 2005
(581 letters)
>mm_chr10_6850745_6851724
Length = 980
Score = 1077 bits (557), Expect = 0.0
Identities = 575/581 (98%), Gaps = 1/581 (0%)
Strand = Plus / Minus
Query: 1 cctgacctggagctgcccagggcttcaaacatgagagcatggtgaagcaaaaggctcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 cctgacctggagctgcccagggcttcaaacatgagagcatggtgaagcaaaaggctcttc 721
Query: 61 ccaccactctaattagcacagcctgactcgtgtacgctgggttgacgggaaagagtaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ccaccactctaattagcacagcctgactcgtgtacgctgggttgacgggaaagagtaccc 661
Query: 121 tgggctctgggggtccttctctcatttttttttctcttaacatactgtgctgccctatgc 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 660 tgggctctgggggtccttctctca-ttttttttctcttaacatactgtgctgccctatgc 602
Query: 181 tttcctcttttttatcattgacagcatcgagtcagttgtactgaggaaacagccaggcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tttcctcttttttatcattgacagcatcgagtcagttgtactgaggaaacagccaggcaa 542
Query: 241 aagaaagttaattctgagagcaagaaagaggccgagagaagggggctgtgactcgggatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagaaagttaattctgagagcaagaaagaggccgagagaagggggctgtgactcgggatt 482
Query: 301 caggagcagaatagtgttagggcttgagccatcctggccagccttctacctacttgtgat 360
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |
Sbjct: 481 caggagcagaatagtgttagggctcaagccgtcctggccagccttctacctacttgtggt 422
Query: 361 gtcagccagtgctggttgctttatttcaataaaaatgtttgtgtacaataatgcgcttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtcagccagtgctggttgctttatttcaataaaaatgtttgtgtacaataatgcgcttcc 362
Query: 421 cacagctcactcaataatcagtgaattaaggacactttctccccaagtcaaggagttgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cacagctcactcaataatcagtgaattaaggacactttctccccaagtcaaggagttgaa 302
Query: 481 agtctagcagatacgtttgtggtttaataatttcagtgttttccacccttggctttattg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agtctagcagatacgtttgtggtttaataatttcagtgttttccacccttggctttattg 242
Query: 541 tcttcctcatgctctgcattaaaaatccccaaaggcacagt 581
||||||||||| |||||||||||||||||||||||||||||
Sbjct: 241 tcttcctcatgttctgcattaaaaatccccaaaggcacagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 980
Length adjustment: 10
Effective length of query: 571
Effective length of database: 970
Effective search space: 553870
Effective search space used: 553870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
