Query= MSMg01no488_e08.b1 MSMg01no488_e08.b1 CHROMAT_FILE:
MSMg01no488_e08.b1 PHD_FILE: MSMg01no488_e08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:08 2005
(710 letters)
>mm_chr10_56418869_56419983
Length = 1115
Score = 1268 bits (656), Expect = 0.0
Identities = 684/696 (98%), Gaps = 5/696 (0%)
Strand = Plus / Plus
Query: 20 tttacgttgtcaaatttaaaattatatatattgtattttctgagtttcatataatattat 79
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 220 tttacgttgtcaaatttaaaattatatatattgtattttctgagtttcatacaatattat 279
Query: 80 actgatttcctgatttctttgatagtcttattaaagtcttatatattataatatttaaaa 139
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 280 actgatttcctgatttctttgatagtcttactaaagtcttatatattataatatttaaaa 339
Query: 140 caatcgtttaatcatttgttaggtgagaaaactaatttcattaatggtatctttaaatct 199
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 caattgtttaatcatttgttaggtgagaaaactaatttcattaatggtatctttaaatct 399
Query: 200 cttttcctttttagttatttgggttttaatttattatgtttaagcacatagtcatttcaa 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cttttcctttttagttatttgggttttaatttattatgtttaagcacatagtcatttcaa 459
Query: 260 acttttaactatctgtgaataatacgtactctctcctgtttttcaagacacagttggagt 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 acttttaactatctgtgaataatacgtactctctcctgtttttcaagacacagttggagt 519
Query: 320 ttatttagaaaacattttaacacagatttgaacaaggccgataattagaagaaagtgtgc 379
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 520 ttatttaaaaaacattttaacacagatttgaacaaggccgataattagaagaaagtgtcc 579
Query: 380 ccccccccc-----acacacacagagtaatacacttccaggtgtggatatgtgcttcaca 434
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ccccccccccacacacacacacagagtaatacacttccaggtgtggatatgtgcttcaca 639
Query: 435 acagagttcttgtgaatgcatggctttgcaatagccatatacttgattttgtgacttaaa 494
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 agagagttcttgtgaatgcatggctttgcaatagccatatacttgattttgtgacttaaa 699
Query: 495 ttctctaaggattcctaagaaacttctgtgagctcatagggtgatccctgaaaggcagta 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ttctctaaggattcctaagaaacttctgtgagctcatagggtgatccctgaaaggcagta 759
Query: 555 aataggaagagaaagtgggggataaggctgagctcatagacataaaaaaacctttttgta 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 aataggaagagaaagtgggggataaggctgagctcatagacataaaaaaacctttttgta 819
Query: 615 caggaaaccagacactaagactaaaccccaatatatgagacctcatgaatctaagaaaga 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 820 caggaaaccagacactaagactaaaccccaatatatgagacctcatgaatctaagaagga 879
Query: 675 cgccatcatttgaacaaactggaagctaaagactgg 710
||||||||||||||||||||||||||||||||||||
Sbjct: 880 cgccatcatttgaacaaactggaagctaaagactgg 915
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 710
Length of database: 1115
Length adjustment: 10
Effective length of query: 700
Effective length of database: 1105
Effective search space: 773500
Effective search space used: 773500
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no488_e08.g1 MSMg01no488_e08.g1 CHROMAT_FILE:
MSMg01no488_e08.g1 PHD_FILE: MSMg01no488_e08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:08 2005
(178 letters)
>mm_chr10_56563823_56564400
Length = 578
Score = 321 bits (166), Expect = 1e-92
Identities = 175/180 (97%), Gaps = 4/180 (2%)
Strand = Plus / Minus
Query: 1 tttttcccactactcaagtttgatgatatggctatgtgtatttatgtgcacaagaataat 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 335 tttttcccactactcaagtttgatgatatggctatgtgtatttatgtgcataagaataat 276
Query: 61 ctagcaatcgtaggaggaagaaaaacaaataaaacaagaaatacgaccgggaggaagata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ctagcaatcgtaggaggaagaaaaacaaataaaacaagaaatacgaccgggaggaagata 216
Query: 121 ttagttaa----atatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 176
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 ttagttaaatatatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 156
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 178
Length of database: 578
Length adjustment: 8
Effective length of query: 170
Effective length of database: 570
Effective search space: 96900
Effective search space used: 96900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
