Query= MSMg01no489_p12.b1 MSMg01no489_p12.b1 CHROMAT_FILE:
MSMg01no489_p12.b1 PHD_FILE: MSMg01no489_p12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:24 2005
(144 letters)
>mm_chr10_4542795_4543338
Length = 544
Score = 267 bits (138), Expect = 2e-76
Identities = 140/141 (99%)
Strand = Plus / Minus
Query: 1 catatctagncttgctattttcatctgatatccacttaatggcaaaaacttggcctcagt 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 catatctagtcttgctattttcatctgatatccacttaatggcaaaaacttggcctcagt 282
Query: 61 tttcccacccacaaaatggggaagaaaacaaaactggattaaatggatgatctaattaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tttcccacccacaaaatggggaagaaaacaaaactggattaaatggatgatctaattaaa 222
Query: 121 agcatctgtttatctagttaa 141
|||||||||||||||||||||
Sbjct: 221 agcatctgtttatctagttaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 544
Length adjustment: 8
Effective length of query: 136
Effective length of database: 536
Effective search space: 72896
Effective search space used: 72896
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no489_p12.g1 MSMg01no489_p12.g1 CHROMAT_FILE:
MSMg01no489_p12.g1 PHD_FILE: MSMg01no489_p12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:24 2005
(316 letters)
>mm_chr10_4403729_4404444
Length = 716
Score = 557 bits (288), Expect = e-163
Identities = 306/312 (98%)
Strand = Plus / Plus
Query: 5 aaataggaaagaagaaaatcaacagaagaaaccttaaggaaaagtaggaattgagaattc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 aaataggaaagaagaaaatcaacagaagaaaccttaaggaaaagtaggaattgagaattc 264
Query: 65 tctacaatgggcagaataatgacttccaaacatgtcaccaacctaatccctaagacacat 124
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 265 tctgcaatgggcagaataatgacttccaaagatgtcaccaacctaatccctaagacacat 324
Query: 125 gaaaatgttgcctcgtacagggactttctggatgtgagttcatgaggggtactctacagg 184
||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 325 gaaaatgttgccttgtacagggactttctggatgtgagtccatgaggggtactctacagg 384
Query: 185 ggtacaatagatgcagaggtcaaagctgttgagcaaagccatgagccatggaactgaatc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 385 ggtacaatagatgcagaggtcaaagctgttgagcaaagccatgagccatggaattgaatc 444
Query: 245 agtctcaagatgctggaggcaggcccagctgaaggaagtaggctaatagaggcctctatc 304
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 445 agtctcaagatgctggaggcaggcccagctgaaggaagtaggttaatagaggcctctatc 504
Query: 305 atatcctagcca 316
||||||||||||
Sbjct: 505 atatcctagcca 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
