Query= MSMg01no492_f22.b1 MSMg01no492_f22.b1 CHROMAT_FILE:
MSMg01no492_f22.b1 PHD_FILE: MSMg01no492_f22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:34 2005
(635 letters)
>mm_chr10_101825007_101826044
Length = 1038
Score = 1118 bits (578), Expect = 0.0
Identities = 623/640 (97%), Gaps = 6/640 (0%)
Strand = Plus / Plus
Query: 1 tactttagcaaaactgttttattctccactggcaaacttaactatcgactctagtaagtt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 tactttagcaaaactgttttattctccactggcaaacttaactatcaactctagtaagtt 260
Query: 61 agcattttagtatgatcccactaggagttagcctttgagagatagattttatgtaattct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcattttagtatgatcccactaggagttagcctttgagagatagattttatgtaattct 320
Query: 121 ttcaatttaattgataatctatataatatcacaattcagtaatattttgatttcacatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcaatttaattgataatctatataatatcacaattcagtaatattttgatttcacatgg 380
Query: 181 gaaatgctgctaggcaggttaagtgatgaatgaacataaaaaattggttatcactattga 240
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 381 gaaatgctgctaggcaggttaaatgacgaatgaacataaaaaattggttatcactattga 440
Query: 241 gaatattaattttttttctaaattgagtttttcattacagattttcattatgcactcaga 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatattaattttttt-ctaaattgagtttttcattacagattttcattatgcactcaga 499
Query: 301 ccacaactttctaatcaataatgtaattcataccatgggaaattaaaaagaagactgaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ccacaactttctaatcaataatgtaattcataccatgggaaattaaaaagaagactgaaa 559
Query: 361 agtcaacatagaaattatgtttaagggaatgacaataaatctatgttaatatttgatatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agtcaacatagaaattatgtttaagggaatgacaataaatctatgttaatatttgatatt 619
Query: 421 ttaaatctatttttctacattaaaaacagcttcatagcctctcaaa----attgtgatta 476
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 620 ttaaatctatttttctacattaaaaacagcttcatagcctctcaaagaaaattgtgatta 679
Query: 477 ggaaaacaagataaaatgttgtgctgtttctgtttggggataaacaaattgtattaaaac 536
||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 680 ggaaaacaagataaaattttgtactgtttctgtttggggataaacaaattgaattaaaac 739
Query: 537 tgtcatatatctgtgactgtgctaggctaaatcttgatctcaactctatgaactgaaaag 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tgtcatatatctgtgactgtgctaggctaaatcttgatctcaactctatgaactgaaaag 799
Query: 597 agtaaaaatatagc-cgggagtggtggcgcatgcctttaa 635
||||||||||||| | || |||||||| || ||||||||
Sbjct: 800 agtaaaaatatagtgcaggtgtggtggcacaggcctttaa 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1038
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1028
Effective search space: 642500
Effective search space used: 642500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no492_f22.g1 MSMg01no492_f22.g1 CHROMAT_FILE:
MSMg01no492_f22.g1 PHD_FILE: MSMg01no492_f22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:35 2005
(537 letters)
>mm_chr10_101981632_101982568
Length = 937
Score = 961 bits (497), Expect = 0.0
Identities = 533/559 (95%), Gaps = 22/559 (3%)
Strand = Plus / Minus
Query: 1 ctttattgaatcagcaaatgtttatagaacacttattccagttattttataaggaaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 ctttattgaatcagcaaatgtttatagaacacttattccagttattttataaggaaaaag 654
Query: 61 aaaagcaaagcatctgctattaatgggccaaccatttatgagaacttttatagaaatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 aaaagcaaagcatctgctattaatgggccaaccatttatgagaacttttatagaaatgtt 594
Query: 121 gacactttctat----------------------aaaaaaaaaaaaaaaaaaaaccagag 158
|||||||||||| |||||||||||||||||||| |||||
Sbjct: 593 gacactttctataaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacagag 534
Query: 159 agcattccagcctgtaatacataaaacctaaagtataattttcctgtttggtcatcatcc 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 agcattccagcctgtaatacataaaacctaaagtataattttcctgtttggtcatcatcc 474
Query: 219 attattttatccacattaaatccattgattttccttaaatttgaaataattgtgctccat 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 attattttatccacattaaatccattgattttccttaaatttgaaataattgtgctccat 414
Query: 279 agccatgtgtaacactttccacaaactctcttcaatcaaataaaagtattttgtactagg 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 agccatgtgtaacactttccacaaactctcttcaatcaaataaaagtattttgtactagg 354
Query: 339 ttatatttatttattgttaattacttttaaatatatccagaaagttcgacaacttcatct 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ttatatttatttattgttaattacttttaaatatatccagaaagttcgacaacttcatct 294
Query: 399 agtaagtgaaatgtaacgtgtaacaggggttagcaattgcaatcaattgaaaataccgag 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 agtaagtgaaatgtaacgtgtaacaggggttagcaattgcaatcaattgaaaataccgag 234
Query: 459 tgattaactcttaaggagtcccttgtgcctgctttcttcgctgtgtttagatgggtttaa 518
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 233 tgattaactcttaaggagtcccttgtgcctgctttcttcactgtgttcagatgggtttaa 174
Query: 519 agtcattcctggtactgga 537
||||||||||||| |||||
Sbjct: 173 agtcattcctggtcctgga 155
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
