Query= MSMg01no495_g13.b1 MSMg01no495_g13.b1 CHROMAT_FILE:
MSMg01no495_g13.b1 PHD_FILE: MSMg01no495_g13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:29 2005
(422 letters)
>mm_chr10_104680733_104681554
Length = 822
Score = 601 bits (311), Expect = e-176
Identities = 335/343 (97%)
Strand = Plus / Minus
Query: 8 attcaatgtattaccaagtacaattatgttttctttatgggaacttactgtttagtcgat 67
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 attcaatgtaataccaagtacaattatgttttctttatgggaacttactgtttagtcgat 284
Query: 68 gtaattgtaaattttttaagttaatgtaatttctcttcactatgcttcagtttttgtttg 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gtaattgtaaattttttaagttaatgtaatttctcttcactatgcttcagtttttgtttg 224
Query: 128 tttggcttttgtttgcttgttttttcgagacagggtttcttattgtaaccttagctgccc 187
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 223 tttggcttttgtttgcttgttttttcaagacagggtttcctattgtaaccttagctgccc 164
Query: 188 tggaaactctctctacagaccaggctgtcctcaaattcagcaatccttctgcttttgcct 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 tggaaactctctctacagaccaggctgtcctcaaattcagcaatccttctgcttttgcct 104
Query: 248 catgagtgctgaggttaaaggtgtgtaccaccaccactacttggctccaatacttcagtt 307
||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 103 catgagtgctggggttaaaggtgtgcaccaccaccgctacttggctccaatacttcagtt 44
Query: 308 ttaaaatacatggcataattttattttattttattttatttta 350
|||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 43 ttaaaatacatggcataattttgttttgttttattttatttta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no495_g13.g1 MSMg01no495_g13.g1 CHROMAT_FILE:
MSMg01no495_g13.g1 PHD_FILE: MSMg01no495_g13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:29 2005
(635 letters)
>mm_chr10_104523536_104524570
Length = 1035
Score = 1151 bits (595), Expect = 0.0
Identities = 625/635 (98%), Gaps = 1/635 (0%)
Strand = Plus / Plus
Query: 1 ccactgtttttcatcccagtttatgggactgcagtaggaacctgaacagacttaaccctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccactgtttttcatcccagtttatgggactgcagtaggaacctgaacagacttaaccctg 260
Query: 61 aggaatgcagatccaccattgccagcctgaatatgttgaaattcagaacagattcagaca 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggaatgcagatccacccttgccagcctgaatatgttgaaattcagaacagattcagaca 320
Query: 121 tataagaaaggtgagttttcccttctcagccctctccttctcaccctcctcgtctacact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tataagaaaggtgagttttcccttctcagccctctccttctcaccctcctcgtctacact 380
Query: 181 aatcacacatggagctaggaaatccagaagctgcccttaatcatcagaacttctagcgtt 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatcacacgtggagctaggaaatccagaagctgcccttaatcatcagaacttctagcgtt 440
Query: 241 tggctttctgactccaggactaagaaaagtagacccctctcctcttccctcaattctcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggctttctgactccaggactaagaaaagtagacccctctcctcttccctcaattctcag 500
Query: 301 gccttgggaataaatcacttcattgcctttcctgttttcctatttgcagttaatagactg 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 501 gccttgggaataaatcacttcattgtctttcctgttttcctatttgcagttaatagattg 560
Query: 361 tggggcctttcagcttccatacttagcaagccaatgttcataatttatctctttttatat 420
|||||||||||||||||||||||||||||| |||||| |||||||||||||||||| | |
Sbjct: 561 tggggcctttcagcttccatacttagcaagtcaatgtccataatttatctcttttttt-t 619
Query: 421 atatacctatatactctcattaattctgtctttctgagacccatgactaatataatcagg 480
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 620 atatacctatatactctcattaattctgtctttctgagacccatgattaatataatcagg 679
Query: 481 taccagtttattcaaagcaaagcaaattttaatactcgaacagaagtgaatttaatttta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 taccagtttattcaaagcaaagcaaattttaatactcgaacagaagtgaatttaatttta 739
Query: 541 atatactaaaagtaagcataaccaattgtgatttcaagaacaaacatgcacaccagtaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atatactaaaagtaagcataaccaattgtgatttcaagaacaaacatgcacaccagtaca 799
Query: 601 acaatcaccaccatctacaacagaccttattataa 635
| |||||||||||||||||||||||||||||||||
Sbjct: 800 aaaatcaccaccatctacaacagaccttattataa 834
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
