Query= MSMg01no496_m07.b1 MSMg01no496_m07.b1 CHROMAT_FILE:
MSMg01no496_m07.b1 PHD_FILE: MSMg01no496_m07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:13 2005
(325 letters)
>mm_chr10_38224033_38224757
Length = 725
Score = 470 bits (243), Expect = e-137
Identities = 298/323 (92%), Gaps = 13/323 (4%)
Strand = Plus / Plus
Query: 1 aggacagcctggtctacaaagtgagttccagtacttccaggggaacacagagaaaccctt 60
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 210 aggacagcctggtctacaaagtgagttccaggacatccaggggaacacagagaaaccctg 269
Query: 61 tctcaaaaaaaaaaaaaaattactttcatca--cccgaagatttggctgatttcagagaa 118
|||| |||||||||| |||||| | ||||||||||||||||||||||||
Sbjct: 270 tctc--------aaaaaaattattttcattatt---gaagatttggctgatttcagagaa 318
Query: 119 aaccattttttcatataaccaaatttaatggaaaaacttctacccatttcattaaatctc 178
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aatgattttttcatataaccaaatttaatggaaaaacttctacccatttcattaaatctc 378
Query: 179 aagctgggaaaattctggttgtcctactgtaatcttgcctatcatggttgtgggttatca 238
|| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 379 aaactgggaaaattctggttgtcctactgtaatcttgcctatcatgggtgtggattatca 438
Query: 239 tcatttatataaacaaatgttttttgtttatataaggactaattaatactaactgctttt 298
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 439 tcatttatataaacaaattttttttgtttatacaaggactaattaatactaactgctttt 498
Query: 299 tgctggagacatcacatacttga 321
|||||||||||||||||||||||
Sbjct: 499 tgctggagacatcacatacttga 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no496_m07.g1 MSMg01no496_m07.g1 CHROMAT_FILE:
MSMg01no496_m07.g1 PHD_FILE: MSMg01no496_m07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:13 2005
(333 letters)
>mm_chr10_38383861_38384595
Length = 735
Score = 572 bits (296), Expect = e-168
Identities = 328/344 (95%), Gaps = 11/344 (3%)
Strand = Plus / Minus
Query: 1 gatacttttatctactatagctttataatgaattttgaaattggtaatagttcttccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gatacttttatctactatagctttataatgaattttgaaattggtaatagttcttccaac 617
Query: 61 tctattatgttcaaatttcaagattttgacatttatttgttgtttttgttttgcatttgc 120
||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 616 tctgttatgttcaaatttcaagattttgacatttgtttgttgtttttgttttgcatttgc 557
Query: 121 catttattttttaaccaaacaaaccaaaccaa-----ac-----aaacaaaaactctaaa 170
|||||||||||||||||||||||||||||||| || ||||||||| ||||||
Sbjct: 556 catttattttttaaccaaacaaaccaaaccaacccaaaccaaccaaacaaaaattctaaa 497
Query: 171 aagttcataacagactttagattcaacca-ttaacatattctggaagattgacatcttaa 229
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 496 aagttcataacagactttagattcaaccaattaacatattctggaagattgacatcttaa 437
Query: 230 aaatatttgttagagaattttaatttctcccacttatccataataggcttctgtatatag 289
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 436 acatatttgttagagaattttaatttctcccacttatccataataggcttttgtatatag 377
Query: 290 atttttccctactttgttcaaatttcaaaaagcttttacaagga 333
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 atttttccctactttgttcaaatttcaaaaagcttttacaagga 333
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 735
Length adjustment: 9
Effective length of query: 324
Effective length of database: 726
Effective search space: 235224
Effective search space used: 235224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
