Query= MSMg01no497_h03.b1 MSMg01no497_h03.b1 CHROMAT_FILE:
MSMg01no497_h03.b1 PHD_FILE: MSMg01no497_h03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:08 2005
(639 letters)
>mm_chr10_36629038_36630075
Length = 1038
Score = 1176 bits (608), Expect = 0.0
Identities = 629/636 (98%), Gaps = 3/636 (0%)
Strand = Plus / Plus
Query: 5 gaattcttaatgtttccaggtgacatgcgaatgattggtcctcacaccattgttccacac 64
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttaatgactccaggtgacatgcgaatgattggtcctcacaccattgttccacac 264
Query: 65 cactccccaccctcaccccacatcctactccaactccaggcaacaaaactgaggaggtag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cactccccaccctcaccccacatcctactccaactccaggcaacaaaactgaggaggtag 324
Query: 125 gggaccagcatcttcccggctggcaggaaccttagacagtggagggatggtgctgctgca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gggaccagcatcttcccggctggcaggaaccttagacagtggagggatggtgctgctgca 384
Query: 185 cttgtatttcataaaatgacaacaggtcacaaagtatgcagagaaagagaaaggcacacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cttgtatttcataaaatgacaacaggtcacaaagtatgcagagaaagagaaaggcacacc 444
Query: 245 caagtgcccagactcaaagcacacaggattctgtctgagataccttacagcttattgaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caagtgcccagactcaaagcacacaggattctgtctgagataccttacagcttattgaag 504
Query: 305 atggaagtatgaatctagtagaaaactaccttccagcatgttaagaccattattgattat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atggaagtatgaatctagtagaaaactaccttccagcatgttaagaccattattgattat 564
Query: 365 catcaagtcttctatcttcagaatgaggtgaaaataagtcccacagggcctgggtataag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 catcaagtcttctatcttcagaatgaggtgaaaataagtcccacagggcctgggtataag 624
Query: 425 ctactccatcagcatt-gcagttaggtgtgttctactagcaggcatgtttctggtttacc 483
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctactccatcag-atttgcagttaggtgtgttctactagcaggcatgtttctggtttacc 683
Query: 484 ttgggccatcatagaggtgaaatgcctggcaaagtgaagcaaaagctgctgttgtgtccc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttgggccatcatagaggtgaaatgcctggcaaagtgaagcaaaagctgctgttgtgtccc 743
Query: 544 tactaccaagaaaattgtgaccacctgaactacatagtccaggctccccacttacaggta 603
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 744 tactaccaagaaaattgtgaccac-tgaactacatagtccaggctccccacttacaggta 802
Query: 604 ataatgagcacgcagtgttgtaatcttacctgtgtt 639
|| |||||||| ||||||||||||||||||||||||
Sbjct: 803 atgatgagcacacagtgttgtaatcttacctgtgtt 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1038
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1028
Effective search space: 646612
Effective search space used: 646612
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no497_h03.g1 MSMg01no497_h03.g1 CHROMAT_FILE:
MSMg01no497_h03.g1 PHD_FILE: MSMg01no497_h03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:08 2005
(614 letters)
>mm_chr10_36812247_36813260
Length = 1014
Score = 953 bits (493), Expect = 0.0
Identities = 512/519 (98%), Gaps = 2/519 (0%)
Strand = Plus / Minus
Query: 94 gacaccctgagttctcagtcagggagtggggagattggatgagcaggcataagcctaaaa 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 gacaccctgagttctcagtcagggagtggggagattggatgagcaggcataagcctaaaa 955
Query: 154 gcccagcactcaggggtgctgaggcaggaggatgatgaatttaaggagagcctgagctac 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 gcccagcactcaggggtgctgaggcaggaggatgatgaatttaaggagagcctgagctac 895
Query: 214 agagtacaaaactttaaaaaaaaaaagacaaaggaaaagaaaagggaagaaagaaaaaga 273
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 agagtagaaaactttaaaaaaaaaaagacaaaggaaaagaaaagggaagaaagaaaaaga 835
Query: 274 aaaatgaaaaaggggagaaaggaaggaaagaaggaacaaaggaagaaatgaggactaaag 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 aaaatgaaaaaggggagaaaggaaggaaagaaggaacaaaggaagaaatgaggactaaag 775
Query: 334 gaagggaagcttatgacaagtgaggagactgggaccactgggaagccagaaagacactga 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 gaagggaagcttatgacaagtgaggagactgggaccactgggaagccagaaagacactga 715
Query: 394 ccaggactcccttggcgatactagaagatgatatttaccttatggacaagtcagaggaga 453
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 714 ccaggactcccttggcgatactagaagatgatatttaccttatggacaagccagaggaga 655
Query: 454 ccagggtaaggtcagcctgcaagaactgaatggctagcaacactatgatgcaagctactt 513
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 654 ccagggtaaggtcagcctgcaagaactgaatggctaacaacactatgatacaagctactt 595
Query: 514 cctacagtgccaagaggtggcaccagggaagtctggacataaagctccaggcttggcctc 573
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 594 cctacagtgccaagaggtggcaccagggaagtctggacatgaagctccaggcttggcctc 535
Query: 574 ctactgctggagc--ttttttttttttaattattttttt 610
||||||||||||| ||||||||||||||||||||||||
Sbjct: 534 ctactgctggagcttttttttttttttaattattttttt 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
