Query= MSMg01no498_i08.b1 MSMg01no498_i08.b1 CHROMAT_FILE:
MSMg01no498_i08.b1 PHD_FILE: MSMg01no498_i08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:35 2005
(613 letters)
>mm_chr10_127187805_127188817
Length = 1013
Score = 1123 bits (581), Expect = 0.0
Identities = 603/613 (98%), Gaps = 6/613 (0%)
Strand = Plus / Plus
Query: 4 gaattctatgtggtttc---cggtaaaggtctggttgaagaggtggagcagctctgtcca 60
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctatgtgg---caatcggtaaaggtctggttgaagaggtggagcagctctgtcca 260
Query: 61 gttgtggatgtctctaaaatcattgtccggtgccaaggtggagacgggcctggggctggg 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 gttgtggatgtctctaaaatcattgtccggttccaaggtggagacgggcctggggctggg 320
Query: 121 tatgactgacatgagggccaacttgggtctgttggacagaagagagggttggaaaagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgactgacatgagggccaacttgggtctgttggacagaagagagggttggaaaagaag 380
Query: 181 aaagagagagagagtccctgagaaggcagcctctgtctgcccccatacctccaactaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagagagagagagtccctgagaaggcagcctctgtctgcccccatacctccaactaaaa 440
Query: 241 ggcctcaggggcctgggggaactctctggctgagggaatgtgagaaaagcatgtttagga 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 ggcctcaggggcctgggggaactctctggctgagggaaggtgagaaaagcatgtttagga 500
Query: 301 ctcagattatgtctgcgttagtttgacccaagaacagacattttgtaggaaaattggtgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcagattatgtctgcgttagtttgacccaagaacagacattttgtaggaaaattggtgt 560
Query: 361 tatttgtacccaacaaggtttcttcccagcaattccagcttactagcatccccagtggtc 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tacttgtacccaacaaggtttcttcccagcaattccagcttactagcatccccagtggtc 620
Query: 421 tctaattctgattccctcttgagattttactaatttagtgcaatctccattaggggttcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctaattctgattccctcttgagattttactaatttagtgcaatctccattaggggttcc 680
Query: 481 tgctctgccttgctatttggtcataggtttgggatacacagacacacagacagacaccca 540
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgttctgccttgctatttggtcataggtttgggatacacagacacacagacagacaccca 740
Query: 541 cccacccctcacacctctgagctgcccctgggaaaatctttggatcccatgggaaagcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cccacccctcacacctctgagctgcccctgggaaaatctttggatcccatgggaaagcca 800
Query: 601 tttgtctccagtc 613
|||||||||||||
Sbjct: 801 tttgtctccagtc 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space: 604809
Effective search space used: 604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no498_i08.g1 MSMg01no498_i08.g1 CHROMAT_FILE:
MSMg01no498_i08.g1 PHD_FILE: MSMg01no498_i08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:36 2005
(160 letters)
>mm_chr10_127383634_127384193
Length = 560
Score = 306 bits (158), Expect = 6e-88
Identities = 158/158 (100%)
Strand = Plus / Minus
Query: 1 tttgctctgtctggacagaaactctggaatgagcaagtactcctagagctgataaccctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tttgctctgtctggacagaaactctggaatgagcaagtactcctagagctgataaccctg 260
Query: 61 agtcacagaaactcacagagcagccttccaaacccagaaccagaggtctacgtctcaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 agtcacagaaactcacagagcagccttccaaacccagaaccagaggtctacgtctcaagc 200
Query: 121 ttccttccttccttccttccttccttccttccttcctt 158
||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ttccttccttccttccttccttccttccttccttcctt 162
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 160
Length of database: 560
Length adjustment: 8
Effective length of query: 152
Effective length of database: 552
Effective search space: 83904
Effective search space used: 83904
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
