Query= MSMg01no499_n17.b1 MSMg01no499_n17.b1 CHROMAT_FILE:
MSMg01no499_n17.b1 PHD_FILE: MSMg01no499_n17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:21 2005
(601 letters)
>mm_chr10_5649453_5650454
Length = 1002
Score = 1077 bits (557), Expect = 0.0
Identities = 593/607 (97%), Gaps = 7/607 (1%)
Strand = Plus / Plus
Query: 1 gtgagggg-aaaaaccgcacttcatccaatatttcttaagcatattctttatctttccat 59
|||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gtgaggggaaaaaaccacacttcatccaatatttcttaagcatattctttatctttccat 256
Query: 60 tcatgtaatcaacgaacaactagaactgaaagatccagaaacccactgaaggcaataaga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tcatgtaatcaacgaacaactagaactgaaagatccagaaacccactgaaggcaataaga 316
Query: 120 aaaaatgatcatgacctttgtttactaggaagaagagattatatatttgtgactgatttc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aaaaatgatcatgacctttgtttactaggaagaagagattatatatttgtgactgatttc 376
Query: 180 tatcttttcaaaagagcccaaatagttttattttcatattaaggcaaaacatacctgttg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tatcttttcaaaagagcccaaatagttttattttcatattaaggcaaaacatacctgttg 436
Query: 240 tgcatttatgattttttttgtccatatcaagacatgaagggggggtatacaatgacagtt 299
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tgcatttatgattttttt-gtccatatcaagacatgaagggggggtatacaatgacagtt 495
Query: 300 cttcagagttgtatctactctatcccaaattttcaggacttaatgatgaggaaaaatatc 359
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 cttcagagttgtatatactctatcccaaattttcaggacttaatgatgaggaaaaatatc 555
Query: 360 atcatactcccctggtattttttaaaaatttttatattgcaagtaaccaa----gtaaat 415
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 556 atcatactcccctggtattttttaaaaatttttatattgcaagtaaccaaccaagtaaat 615
Query: 416 gtaattagtctccagggaagtcgtttggtagcctgctgtgcacgggcctcttctttttga 475
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 616 gtaattagtctccagggaagtcgtttggtagcctgctgtgcacgggcctcttctctttga 675
Query: 476 -ctacatatacttcatgttgtgttccttcctcactacattttaagatccttgcagccagt 534
|||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||
Sbjct: 676 actacatatacttcatgttgtgttcctccctcactacatgttgagatccttgcagccagt 735
Query: 535 accatacaagcaagcttatatttattagtcagcaagtatgatggaagcaaatgaatacat 594
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 736 accatacaagcaagcttatatttattagtcagcaagtatgatagaagcaaatgaatacat 795
Query: 595 aaataca 601
|||||||
Sbjct: 796 aaataca 802
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1002
Length adjustment: 10
Effective length of query: 591
Effective length of database: 992
Effective search space: 586272
Effective search space used: 586272
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no499_n17.g1 MSMg01no499_n17.g1 CHROMAT_FILE:
MSMg01no499_n17.g1 PHD_FILE: MSMg01no499_n17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:21 2005
(211 letters)
>mm_chr10_5796727_5797336
Length = 610
Score = 393 bits (203), Expect = e-114
Identities = 209/211 (99%), Gaps = 1/211 (0%)
Strand = Plus / Minus
Query: 1 gaaaggaacccagtgaccttttttgatggtttgcaaatgagtctcattgaagtacagatg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gaaaggaacccagtgaccttttttgatggtttgcaaatgagtctcattgaagtacagata 351
Query: 61 aaaaaatcgacattatctgagtaattcatttatatttactgactgttcaattattttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 350 aaaaaatcgacattatctgagtaattcatttatatttactgactgttcaatta-tttttt 292
Query: 121 tttcttcaaaaaaatccatttgtatcaaaccagctaaagactcagaaagaaagactggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tttcttcaaaaaaatccatttgtatcaaaccagctaaagactcagaaagaaagactggag 232
Query: 181 agcaaagaagttcatatgaacctccttcggc 211
|||||||||||||||||||||||||||||||
Sbjct: 231 agcaaagaagttcatatgaacctccttcggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 211
Length of database: 610
Length adjustment: 9
Effective length of query: 202
Effective length of database: 601
Effective search space: 121402
Effective search space used: 121402
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
