CCTTTTTTTNNCCCTTTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTT
CAGGATCCGCGGAATTCCTGGAATATCCCATTTCTCATAATCTGTAATCT
TATTTTGTGAGTAGCTCAGGACCTTCCTGTGCCAAGAGGCAAGCTCATGT
TCGGTCATTGAGGCATCTCTGATTGTCTGGTCATTCCTAAATGTGAAGGA
AATGCTGCTTGCTCTAGTTAATATTAGCATCCTTCCTCAGGCCTTAACCT
TAGAAATGTCTAAGCTCTAAACCTCTGCTAGCATTAACAGAAATATTTTA
CTTGAATTAACCATGTTGTTTAATTTGATAATGTCACATTACCTACATAC
TTTATCGAGAAATAAGGATGGTTTCTAAGCTGGAATTTCTATAGACCAGG
AAGTGGTACTTGAGAATCTGAGAAAATGGAAGAAATGGAGAAAAAAATGT
TTCTGGACAAAGAGCTCAACTGGTATAAGTTCTTGCCACACAAGCTTAAA
GGCCTGAGTTCAATCCATGGGACACCTATGAAAAGACAGATACAGGGATG
GAAATCCAGAATTCTAGTGAATAAAAGCACTTATTGCATGAGCCTTGATA
ACCTGCATCCAATTCCTAAGAACCATATAAAAAGTTGAATGTGTACATTT
GTAATTCTCATTGAACCACCATTTAAAAACTTGACTGGAGAAAGGTGGCT
TGCATGCAGCCCAGGTACATACCTGTC

CATTTACGCCTTTTTATATGAAAATTCTGCGTCACCACCCTTTAGCGCTT
ATTGGGTTACTCCAACTTCCCCCGCAAGAAATAAAAAATCGACGGGACAC
TGGTTCCTACATTTTATGATACCTCTATACCCCGATTGTCCATTTTGACT
ACCCATTGTCATTACTCAAACCGCGACGGAAGCGACCGATATGTTAGCCC
TATATCTAACAATTCACTGATACCCAATAAAGAGGCGCGAGGCGGCTAAC
CTCCCCATCTCACTTTTTACCCCACGTGATCTCTTGTCAATTGACACGGT
GTTTTCCCCAGTATATATTTTTTTNTCTTTNNNNTTTCGCCCAAAAAGGG
AAAAAAAAGAGGGGGGGGGTTTTAAAAGGGGCCCCCTGGGGGTGTGGGGG
GGNACCCGGGGGNCCCCCCGTGGAGGGCTTTTGGCTTCNTCTTGCCNCAA
AAAAAAAAATAATTTTTGGAAGANGGGGGTGGTGGGGTAAAAAACACCCT
TTTAAATTTAAAGGGGAAAAAAAGGGGGTGTTTATATTCCCTCCGGCGGC
GGGGGGGAAAAAATAAATTTTTCCCCCAACCCCTTTTTTTATAAATAAAA
GAGGGGGGGGCCCCCCCCCTTTAAAAAGAAAGAAAAACACCCCCTTTTTT
TTTTTTGATAAAGGGAGGGGGGGGTGTTTTATCCACCCGCGGGGGAGAAA
AAAAATTTTTTTTTAAAAAAAAACAGCCAATTATTTTTTTGTTTTAAAAC
ACCNCAAAAATAANTTATTTTGTTTAGGTAGCACACACCCTCCCCTTTCT
TGACAAGTNATTTNTAAGAAAGGGCGGGCGCCCCCAACACCAAACAAAAA
AAGATTTTTGGGGTGGGTGGTGGGGGGGTTGCCGGCGCGCTAGCCTCTCC
CCCTTTTTATTCCACAGGTTCCCNCNCCCCCGCNTTTTTTTTTTTCTCCC
CCCCAAGAAGGTGGGGGGGGGGGAAGAAAAAAACACACTCC

Query= MSMg01no503_a23.b1 MSMg01no503_a23.b1 CHROMAT_FILE:
MSMg01no503_a23.b1 PHD_FILE: MSMg01no503_a23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:14 2005
         (530 letters)



>mm_chr10_4941220_4942151
          Length = 932

 Score =  959 bits (496), Expect = 0.0
 Identities = 520/528 (98%), Gaps = 2/528 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctggaatatcc-catttctcataatctgtaatcttattttgtgagtagctcagg 63
           ||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 205 gaattcctggaatatcaacatttctcataatctgtaatcttattttgtgagcagctcagg 264

                                                                       
Query: 64  accttcctgtgccaagaggcaagctcatgttcggtcattgaggcatctctgattgtctgg 123
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acctttctgtgccaagaggcaagctcatgttcggtcattgaggcatctctgattgtctgg 324

                                                                       
Query: 124 tcattcctaaatgtgaaggaaatgctgcttgctctagttaatattagcatccttcctcag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcattcctaaatgtgaaggaaatgctgcttgctctagttaatattagcatccttcctcag 384

                                                                       
Query: 184 gccttaaccttagaaatgtctaagctctaaacctctgctagcattaacagaaatatttta 243
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 385 gccttaaccttagaaatgtctaagctctaaacctctgctaacattaacagaaatatttta 444

                                                                       
Query: 244 cttgaattaaccatgttgtttaatttgataatgtcacattacctacatactttatcgaga 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cttgaattaaccatgttgtttaatttgataatgtcacattacctacatactttatcgaga 504

                                                                       
Query: 304 aataaggatggtttctaagctggaatttctatagaccaggaagtggtacttgagaatctg 363
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aataaggatggtttctaagatggaatttctatagaccaggaagtggtacttgagaatctg 564

                                                                       
Query: 364 agaaaatggaagaaatggagaaaaaaa-tgtttctggacaaagagctcaactggtataag 422
           ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 565 agaaaatggaagaaatggagaaaaaaaatgtttctggacaaagagctcaactagtataag 624

                                                                       
Query: 423 ttcttgccacacaagcttaaaggcctgagttcaatccatgggacacctatgaaaagacag 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttcttgccacacaagcttaaaggcctgagttcaatccatgggacacctatgaaaagacag 684

                                                           
Query: 483 atacagggatggaaatccagaattctagtgaataaaagcacttattgc 530
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atacagggatggaaatccagaattctagtgaataaaagcacttattgc 732


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 932
Length adjustment: 10
Effective length of query: 520
Effective length of database: 922
Effective search space:   479440
Effective search space used:   479440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)