Query= MSMg01no504_e23.b1 MSMg01no504_e23.b1 CHROMAT_FILE:
MSMg01no504_e23.b1 PHD_FILE: MSMg01no504_e23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:53 2005
(547 letters)
>mm_chr10_80742455_80743402
Length = 948
Score = 1015 bits (525), Expect = 0.0
Identities = 539/544 (99%), Gaps = 1/544 (0%)
Strand = Plus / Plus
Query: 5 gaattcactgactattcccgcctccggggctgcggggtctccctgggtgggatgacagat 64
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactgaccgttcccgcctccggggctgcggggtctccctgggtgggatgacagat 264
Query: 65 tccagtgagtcggtggtgcttctgctcgggaccccacagatgcagggcaaagagcagggg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tccagtgagtcggtggtgcttctgctcgggaccccacagatgcagggcaaagagcagggg 324
Query: 125 tacacagacatgaggtgtggcccctcacgggccatcatccttcactcacactggggagtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tacacagacatgaggtgtggcccctcacgggccatcatccttcactcacactggggagtc 384
Query: 185 tgtctggctgtcctcagggctcctctgacccttcagaggtggcggaggaacgtgggaagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgtctggctgtcctcagggctcctctgacccttcagaggtggcggaggaacgtgggaagg 444
Query: 245 gggcgcctgggacaattctgaggtcaggtctgagatgtctgtgggaaaagggcagcaggt 304
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 445 gggcgcctgggacaattctgaggtcaggtctgagatgtctgtggaaaaagggcagcaggt 504
Query: 305 cagccagggtcacacctacctcttgcggtcatgttgttcttgtaacacgggggg-ccatc 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 505 cagccagggtcacacctacctcttgcggtcatgttgttcttgtaacacgggggggccatc 564
Query: 364 aaagccctgatgagctaggggtcctccgaatctcacagaattcaagttggtcatgctgtg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaagccctgatgagctaggggtcctccgaatctcacagaattcaagttggtcatgctgtg 624
Query: 424 cggctctaagtcagttcccatccctttctgagcctccaggagcaaggcttgcagctgcct 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cggctctaagtcagttcccatccctttctgagcctccaggagcaaggcttgcagctgcct 684
Query: 484 tgggctcctcaccttccattanggagctgtcgctgtcgctcactgcgggagggatgttca 543
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgggctcctcaccttccattagggagctgtcgctgtcgctcactgcgggagggatgttca 744
Query: 544 ccag 547
||||
Sbjct: 745 ccag 748
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 948
Length adjustment: 10
Effective length of query: 537
Effective length of database: 938
Effective search space: 503706
Effective search space used: 503706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no504_e23.g1 MSMg01no504_e23.g1 CHROMAT_FILE:
MSMg01no504_e23.g1 PHD_FILE: MSMg01no504_e23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:53 2005
(533 letters)
>mm_chr10_80887494_80888424
Length = 931
Score = 990 bits (512), Expect = 0.0
Identities = 528/534 (98%), Gaps = 4/534 (0%)
Strand = Plus / Minus
Query: 1 cccgtcctggccttctggaggcctccatccaggctgctgctgggagctgggggcgggggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 cccgtcctggccttctggaggcctccatccaggctgctgctgggagctgggggcgggggc 672
Query: 61 aaccccagtgctggctccagccctgaggacttagtgtggccttggcctcagtttccccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 aaccccagtgctggctccagccctgaggacttagtgtggccttggcctcagtttccccca 612
Query: 121 taggagggtgtgggtcgatctggcaggaaggatgccacccctgtgatctcccactcaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 taggagggtgtgggtcgatctggcaggaaggatgccacccctgtgatctcccactcaccc 552
Query: 181 cctcctaccctgagggaatcccccatgggatctcaagagtcccctgaattccaagtgtgg 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 cctcctaccctgagggagtcccccatgggatctcaagagtcccctgaattccaagtgtgg 492
Query: 241 tctctccagctccacacaagcccaggctggacagaaggacccaaggagcaacgctgcagc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tctctccagctccacacaagcccaggctggacagaaggacccaaggagcaacgctgcag- 433
Query: 301 ccccccaacctctccgccctg-cccccccccacatgtcactcatggtgtctgccttgacc 359
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ccccccaacctctccgccctgccccccccccacatgtcactcatggtgtctgccttgacc 373
Query: 360 tgtctctctgtctctgtctctctgtctctcttcacccgtccctcccaaatcggctaattt 419
|| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 372 tg--tctctgtctctgtctctctgtctctcttcacccgtccctcctaaatcggctaattt 315
Query: 420 tacagccagggttcagactgaaataactcctttgctgatccaaccggatcctaccgggag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tacagccagggttcagactgaaataactcctttgctgatccaaccggatcctaccgggag 255
Query: 480 cctggcccggggcggggttggccctgatgtcagtgtccatgccagggcaccagg 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 cctggcccggggcggggttggccctgatgtcagtgtccatgccagggcaccagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 931
Length adjustment: 10
Effective length of query: 523
Effective length of database: 921
Effective search space: 481683
Effective search space used: 481683
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
