MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-504M06
Chromosome	10 (Build37)
Map Location	62,043,862 - 62,044,417
singlet/doublet	singlet
Overlap gene	Ddx21
Upstream gene	Lrrc20, Npffr1, Ppa1, Sar1a, Tysnd1, Aifm2, H2afy2, LOC100039284, Col13a1, EG436164, EG432466, 2010107G23Rik, Neurog3, Tspan15, Tacr2, Hk1, 2210417K05Rik, Hkdc1, Supv3l1, Vps26a, Srgn, 2510003E04Rik
Downstream gene	Ddx50, Stox1, Ccar1, Cxxc6, Slc25a16, Dna2l, Rufy2, Hnrph3, 3110049J23Rik, Pbld, Atoh7, Mypn, 1700120B22Rik, Herc4, Sirt1, Dnajc12, LOC665182, EG631906, Ctnna3
Link	Open Mouse BAC browser

Click to get alignment info.

name	Lrrc20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216011 MGI:2387182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Npffr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237362 MGI:2685082
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins

name	Ppa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67895 MGI:97831
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sar1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20224 MGI:98230
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tysnd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71767 MGI:1919017
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 102 ESTs, 5 Proteins

name	Aifm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71361 MGI:1918611
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	H2afy2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404634 MGI:3037658
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039284 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039284
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs

name	Col13a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12817 MGI:1277201
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG436164 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:436164 MGI:3644575
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 109 ESTs, 12 Proteins pseudo : _no_value

name	EG432466 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432466 MGI:3643173
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 526 ESTs, 6 Proteins pseudo : _no_value

name	2010107G23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69894 MGI:1917144
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Neurog3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11925 MGI:893591
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tspan15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70423 MGI:1917673
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tacr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21337 MGI:98477
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15275 MGI:96103
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2210417K05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70162 MGI:1917412
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Hkdc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216019 MGI:2384910
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Supv3l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:338359 MGI:2441711
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vps26a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30930 MGI:1353654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Srgn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19073 MGI:97756
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2510003E04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72320 MGI:1919570
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ddx21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56200 MGI:1860494
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ddx50 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94213 MGI:2182303
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stox1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216021 MGI:2684909
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs, 3 Proteins

name	Ccar1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67500 MGI:1914750
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cxxc6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52463 MGI:1098693
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 133 ESTs, 2 Proteins

name	Slc25a16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73132 MGI:1920382
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dna2l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:327762 MGI:2443732
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rufy2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70432 MGI:1917682
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hnrph3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432467 MGI:1926462
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3110049J23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67307 MGI:1914557
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pbld (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68371 MGI:1915621
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atoh7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53404 MGI:1355553
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mypn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68802 MGI:1916052
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 22 ESTs, 5 Proteins

name	1700120B22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:641387 MGI:3604190
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 8 ESTs, 1 Protein

name	Herc4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67345 MGI:1914595
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sirt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93759 MGI:2135607
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnajc12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30045 MGI:1353428
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665182 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665182
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 5 Proteins pseudo : _no_value

name	EG631906 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:631906 MGI:3646561
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 45 ESTs, 3 Proteins

name	Ctnna3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216033 MGI:2661445
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrrc20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956307 GeneID:216011 MGI:2387182
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat containing 20 transcript_id : NM_153542.1

name	Npffr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82933095 GeneID:237362 MGI:2685082
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins product : neuropeptide FF receptor 1 transcript_id : XM_137119.4

name	Ppa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802132 GeneID:67895 MGI:97831
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pyrophosphatase (inorganic) 1 transcript_id : NM_026438.3

name	Sar1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130548 GeneID:20224 MGI:98230
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SAR1 gene homolog A (S. cerevisiae) transcript_id : NM_009120.2

name	Tysnd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388223 GeneID:71767 MGI:1919017
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 102 ESTs, 5 Proteins product : trypsin domain containing 1, transcript variant 1 transcript_id : XM_125636.3

name	Aifm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142359615 GeneID:71361 MGI:1918611
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apoptosis-inducing factor, mitochondrion-associated 2 transcript_id : NM_001039194.2

name	Aifm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130271 GeneID:71361 MGI:1918611
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apoptosis-inducing factor, mitochondrion-associated 2 transcript_id : NM_178058.3

name	Aifm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24418884 GeneID:71361 MGI:1918611
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apoptosis-inducing factor, mitochondrion-associated 2 transcript_id : NM_153779.1

name	H2afy2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892300 GeneID:404634 MGI:3037658
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : H2A histone family, member Y2 transcript_id : NM_207000.2

name	LOC100039284 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260898 GeneID:100039284
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs product : similar to TBP-associated factor 4 transcript_id : XM_001472609.1

name	Col13a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131174 GeneID:12817 MGI:1277201
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type XIII, alpha 1 transcript_id : NM_007731.2

name	2010107G23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364488 GeneID:69894 MGI:1917144
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2010107G23 gene transcript_id : NM_027251.3

name	Neurog3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351623 GeneID:11925 MGI:893591
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neurogenin 3 transcript_id : NM_009719.5

name	Tspan15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347497 GeneID:70423 MGI:1917673
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetraspanin 15 transcript_id : NM_197996.2

name	Tacr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802904 GeneID:21337 MGI:98477
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tachykinin receptor 2 transcript_id : NM_009314.3

name	Hk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388724 GeneID:15275 MGI:96103
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hexokinase 1 transcript_id : NM_010438.2

name	2210417K05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260911 GeneID:70162 MGI:1917412
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : RIKEN cDNA 2210417K05 gene transcript_id : XM_001474070.1

name	Hkdc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21703835 GeneID:216019 MGI:2384910
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hexokinase domain containing 1 transcript_id : NM_145419.1

name	Supv3l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31340650 GeneID:338359 MGI:2441711
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : suppressor of var1, 3-like 1 (S. cerevisiae) transcript_id : NM_181423.2

name	Vps26a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130955 GeneID:30930 MGI:1353654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vacuolar protein sorting 26 homolog A (yeast) transcript_id : NM_133672.2

name	Srgn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129990 GeneID:19073 MGI:97756
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serglycin transcript_id : NM_011157.2

name	2510003E04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:72384370 GeneID:72320 MGI:1919570
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2510003E04 gene transcript_id : NM_028197.2

name	Ddx21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:72384373 GeneID:56200 MGI:1860494
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 transcript_id : NM_019553.2

name	Ddx50 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351139 GeneID:94213 MGI:2182303
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 transcript_id : NM_053183.2

name	Stox1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388229 GeneID:216021 MGI:2684909
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs, 3 Proteins product : storkhead box 1 transcript_id : XM_125685.5

name	Ccar1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801893 GeneID:67500 MGI:1914750
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell division cycle and apoptosis regulator 1 transcript_id : NM_026201.2

name	Cxxc6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260917 GeneID:52463 MGI:1098693
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 133 ESTs, 2 Proteins product : CXXC finger 6, transcript variant 1 transcript_id : XM_125673.7

name	Slc25a16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31340837 GeneID:73132 MGI:1920382
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16 transcript_id : NM_175194.2

name	Dna2l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376001 GeneID:327762 MGI:2443732
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA2 DNA replication helicase 2-like (yeast) transcript_id : NM_177372.2

name	Rufy2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119637824 GeneID:70432 MGI:1917682
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RUN and FYVE domain-containing 2 transcript_id : NM_027425.3

name	Hnrph3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119637822 GeneID:432467 MGI:1926462
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein H3 transcript_id : NM_001079824.1

name	3110049J23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388988 GeneID:67307 MGI:1914557
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3110049J23 gene transcript_id : NM_026085.2

name	Pbld (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560131 GeneID:68371 MGI:1915621
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phenazine biosynthesis-like protein domain containing transcript_id : NM_026701.2

name	Atoh7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:8392931 GeneID:53404 MGI:1355553
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : atonal homolog 7 (Drosophila) transcript_id : NM_016864.1

name	Mypn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388230 GeneID:68802 MGI:1916052
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 22 ESTs, 5 Proteins product : myopalladin transcript_id : XM_483911.3

name	1700120B22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260900 GeneID:641387 MGI:3604190
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 8 ESTs, 1 Protein product : RIKEN cDNA 1700120B22 gene transcript_id : XM_001472786.1

name	Herc4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:32451487 GeneID:67345 MGI:1914595
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hect domain and RLD 4 transcript_id : NM_026101.2

name	Sirt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9790228 GeneID:93759 MGI:2135607
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sirtuin 1 ((silent mating type information regulation 2, homolog) 1 (S. cerevisiae) transcript_id : NM_019812.1

name	Dnajc12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363832 GeneID:30045 MGI:1353428
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DnaJ (Hsp40) homolog, subfamily C, member 12 transcript_id : NM_013888.2

name	EG631906 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388234 GeneID:631906 MGI:3646561
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 45 ESTs, 3 Proteins product : predicted gene, EG631906 transcript_id : XM_975147.1

name	Ctnna3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377931 GeneID:216033 MGI:2661445
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : catenin (cadherin associated protein), alpha 3 transcript_id : NM_177612.2

name	Npffr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82933096 GeneID:237362 MGI:2685082
definition	codon_start : 1 product : similar to RFamide-related peptide receptor protein_id : XP_137119.4

name	Ppa1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754065 CCDS:CCDS23882.1 GeneID:67895 MGI:97831
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IDA] GO_process : GO:0006796 - phosphate metabolism [Evidence IC] codon_start : 1 product : pyrophosphatase protein_id : NP_080714.2

name	Sar1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703344 CCDS:CCDS23883.1 GeneID:20224 MGI:98230
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0016529 - sarcoplasmic reticulum [Evidence IDA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0016192 - vesicle-mediated transport [Evidence IDA] codon_start : 1 note : SAR1a gene homolog 1 product : SAR1a gene homolog protein_id : NP_033146.1

name	Tysnd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260906 GeneID:71767 MGI:1919017
definition	codon_start : 1 product : trypsin domain containing 1 isoform 1 protein_id : XP_125636.3

name	Aifm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24418885 GeneID:71361 MGI:1918611
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] [Evidence ISS]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence ISS] [Evidence IEA]; GO:0004174 - electron-transferring-flavoprotein dehydrogenase activity [Evidence ISS]; GO:0050660 - FAD binding [Evidence ISS]; GO:0003674 - molecular_function [Evidence ND]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence ISS]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : isoform 1 is encoded by transcript variant 1; apoptosis-inducing factor (AIF)-like mitochondrion-associated inducer of death product : apoptosis-inducing factor (AIF)-like mitchondrion-associated inducer of death isoform 1 protein_id : NP_722474.1

name	Aifm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85861162 CCDS:CCDS23884.1 GeneID:71361 MGI:1918611
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] [Evidence ISS]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence ISS] [Evidence IEA]; GO:0004174 - electron-transferring-flavoprotein dehydrogenase activity [Evidence ISS]; GO:0050660 - FAD binding [Evidence ISS]; GO:0003674 - molecular_function [Evidence ND]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence ISS]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 3; apoptosis-inducing factor (AIF)-like mitochondrion-associated inducer of death product : apoptosis-inducing factor (AIF)-like mitchondrion-associated inducer of death isoform 2 protein_id : NP_001034283.1

name	Aifm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30017355 CCDS:CCDS23884.1 GeneID:71361 MGI:1918611
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] [Evidence ISS]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence ISS] [Evidence IEA]; GO:0004174 - electron-transferring-flavoprotein dehydrogenase activity [Evidence ISS]; GO:0050660 - FAD binding [Evidence ISS]; GO:0003674 - molecular_function [Evidence ND]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence ISS]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; apoptosis-inducing factor (AIF)-like mitochondrion-associated inducer of death product : apoptosis-inducing factor (AIF)-like mitchondrion-associated inducer of death isoform 2 protein_id : NP_835159.1

name	H2afy2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46250738 CCDS:CCDS23885.1 GeneID:404634 MGI:3037658
definition	GO_component : GO:0001740 - Barr body [Evidence ISS]; GO:0005694 - chromosome [Evidence IEA]; GO:0000786 - nucleosome [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0007001 - chromosome organization and biogenesis (sensu Eukaryota) [Evidence IEA]; GO:0007549 - dosage compensation [Evidence ISS]; GO:0006334 - nucleosome assembly [Evidence IEA] codon_start : 1 product : H2A histone family, member Y2 protein_id : NP_996883.1

name	LOC100039284 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260899 GeneID:100039284
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472659.1

name	Col13a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680962 GeneID:12817 MGI:1277201
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005911 - intercellular junction [Evidence IDA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 note : type XIII collagen product : procollagen, type XIII, alpha 1 protein_id : NP_031757.1

name	2010107G23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312460 CCDS:CCDS23886.1 GeneID:69894 MGI:1917144
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 product : hypothetical protein LOC69894 protein_id : NP_081527.1

name	Neurog3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560622 CCDS:CCDS23887.1 GeneID:11925 MGI:893591
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IMP]; GO:0030855 - epithelial cell differentiation [Evidence IMP]; GO:0007399 - nervous system development [Evidence IEA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : atonal homolog 5 product : neurogenin 3 protein_id : NP_033849.2

name	Tspan15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347498 GeneID:70423 MGI:1917673
definition	codon_start : 1 note : transmembrane 4 superfamily member 15 product : tetraspanin 15 protein_id : NP_932113.2

name	Tacr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981975 GeneID:21337 MGI:98477
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : tachykinin NK-2 receptor; 7 transmembrane receptor product : tachykinin receptor 2 protein_id : NP_033340.2

name	Hk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754206 GeneID:15275 MGI:96103
definition	GO_component : GO:0005829 - cytosol [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0004396 - hexokinase activity [Evidence TAS] [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006096 - glycolysis [Evidence TAS] codon_start : 1 exception : mismatches in translation note : downeast anemia product : hexokinase 1 protein_id : NP_034568.1

name	2210417K05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260912 GeneID:70162 MGI:1917412
definition	codon_start : 1 product : hypothetical protein LOC70162 protein_id : XP_001474120.1

name	Hkdc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703836 CCDS:CCDS23888.1 GeneID:216019 MGI:2384910
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004396 - hexokinase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006096 - glycolysis [Evidence IEA] codon_start : 1 product : hexokinase domain containing 1 protein_id : NP_663394.1

name	Supv3l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31088872 GeneID:338359 MGI:2441711
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA] codon_start : 1 product : suppressor of var1, 3-like 1 protein_id : NP_852088.1

name	Vps26a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526826 GeneID:30930 MGI:1353654
definition	GO_component : GO:0005829 - cytosol [Evidence ISS]; GO:0005768 - endosome [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0008565 - protein transporter activity [Evidence ISS] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0042147 - retrograde transport, endosome to Golgi [Evidence IDA] [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : vacuole protein sorting 26; H beta 58 product : vacuolar protein sorting 26 protein_id : NP_598433.1

name	Srgn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6997243 CCDS:CCDS23889.1 GeneID:19073 MGI:97756
definition	codon_start : 1 note : proteoglycan, secretory granule product : proteoglycan 1, secretory granule protein_id : NP_035287.1

name	2510003E04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:72384371 CCDS:CCDS23890.1 GeneID:72320 MGI:1919570
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC72320 protein_id : NP_082473.2

name	Ddx21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:72384374 CCDS:CCDS23891.1 GeneID:56200 MGI:1860494
definition	GO_component : GO:0005730 - nucleolus [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence ISS] [Evidence IEA]; GO:0003724 - RNA helicase activity [Evidence ISS] codon_start : 1 note : DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 21 (RNA helicase II/Gu); RH II/Gu; RH-II/Gualpha product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 protein_id : NP_062426.2

name	Ddx50 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716475 CCDS:CCDS23892.1 GeneID:94213 MGI:2182303
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : RH-II/Gubeta; nucleolar protein GU2; DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 50 product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 protein_id : NP_444413.1

name	Stox1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38090490 GeneID:216021 MGI:2684909
definition	codon_start : 1 product : storkhead box 1 protein_id : XP_125685.3

name	Ccar1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33563288 GeneID:67500 MGI:1914750
definition	GO_component : GO:0005641 - nuclear envelope lumen [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0007049 - cell cycle [Evidence IEA]; GO:0043065 - positive regulation of apoptosis [Evidence ISS] codon_start : 1 product : cell division cycle and apoptosis regulator 1 protein_id : NP_080477.1

name	Cxxc6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82933099 GeneID:52463 MGI:1098693
definition	codon_start : 1 product : CXXC finger 6 isoform 1 protein_id : XP_125673.5

name	Slc25a16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424808 CCDS:CCDS23893.1 GeneID:73132 MGI:1920382
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] codon_start : 1 product : solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16 protein_id : NP_780403.1

name	Dna2l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46849783 GeneID:327762 MGI:2443732
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : DNA2 DNA replication helicase 2-like protein_id : NP_796346.1

name	Rufy2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119637825 GeneID:70432 MGI:1917682
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : RUN and FYVE domain-containing 2 protein_id : NP_081701.2

name	Hnrph3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119637823 GeneID:432467 MGI:1926462
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 note : hnRNP 2H9 product : heterogeneous nuclear ribonucleoprotein H3 protein_id : NP_001073293.1

name	3110049J23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385584 CCDS:CCDS23894.1 GeneID:67307 MGI:1914557
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA] GO_process : GO:0009058 - biosynthesis [Evidence IEA] codon_start : 1 product : MAWD binding protein homolog 2 protein_id : NP_080361.1

name	Pbld (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560132 CCDS:CCDS23895.1 GeneID:68371 MGI:1915621
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA] GO_process : GO:0009058 - biosynthesis [Evidence IEA] codon_start : 1 product : MAWD binding protein homolog 1 protein_id : NP_080977.2

name	Atoh7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8392932 CCDS:CCDS23896.1 GeneID:53404 MGI:1355553
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0007623 - circadian rhythm [Evidence IMP]; GO:0009649 - entrainment of circadian clock [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 product : atonal homolog 7 protein_id : NP_058560.1

name	Mypn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94388231 GeneID:68802 MGI:1916052
definition	codon_start : 1 product : myopalladin protein_id : XP_483911.3

name	1700120B22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260901 GeneID:641387 MGI:3604190
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472836.1

name	Herc4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32451488 CCDS:CCDS23897.1 GeneID:67345 MGI:1914595
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0004842 - ubiquitin-protein ligase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : hect domain and RLD 4 protein_id : NP_080377.2

name	Sirt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790229 CCDS:CCDS23898.1 GeneID:93759 MGI:2135607
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0017136 - NAD-dependent histone deacetylase activity [Evidence IDA]; GO:0016564 - transcriptional repressor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0016575 - histone deacetylation [Evidence IDA]; GO:0016481 - negative regulation of transcription [Evidence IDA]; GO:0001542 - ovulation (sensu Mammalia) [Evidence IMP]; GO:0007283 - spermatogenesis [Evidence IMP]; GO:0007519 - striated muscle development [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 function : have NAD-dependent histone deacetylase and putative mono-ADP-ribosyltransferase activities note : sir2-like 1 product : sirtuin 1 ((silent mating type information regulation 2, homolog) 1 protein_id : NP_062786.1

name	Dnajc12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13994138 CCDS:CCDS23899.1 GeneID:30045 MGI:1353428
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : J domain protein 1 product : DnaJ (Hsp40) homolog, subfamily C, member 12 protein_id : NP_038916.1

name	EG631906 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94388235 GeneID:631906 MGI:3646561
definition	codon_start : 1 product : similar to zinc RING finger protein SAG protein_id : XP_980241.1

name	Ctnna3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29243986 CCDS:CCDS23901.1 GeneID:216033 MGI:2661445
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IEA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005916 - fascia adherens [Evidence ISS]; GO:0030027 - lamellipodium [Evidence IDA] GO_function : GO:0045296 - cadherin binding [Evidence TAS] [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA] [Evidence IPI]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0016337 - cell-cell adhesion [Evidence IPI] codon_start : 1 exception : mismatches in translation note : alpha-catenin-like protein; catenin alpha 3; alpha T-catenin product : catenin (cadherin associated protein), alpha 3 protein_id : NP_808280.1

name	EG436164 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149260907 GeneID:436164 MGI:3644575
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 109 ESTs, 12 Proteins product : predicted gene, EG436164 pseudo : _no_value transcript_id : XR_001738.2

name	EG432466 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:84579875 GeneID:432466 MGI:3643173
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 526 ESTs, 6 Proteins product : predicted gene, EG432466 pseudo : _no_value transcript_id : NR_002687.1

name	LOC665182 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260902 GeneID:665182
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 5 Proteins product : similar to calcyclin binding protein pseudo : _no_value transcript_id : XR_030886.1

clone name	MSMg01-407C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290F02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-293N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197G19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-501N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386N16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-485H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465B04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-504M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343L12
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-504M06.T7 (MSMg01no504_m06.b1)	MSMg01-504M06.TJ (MSMg01no504_m06.g1)
ACC	AG579566	AG579567
length	821	759
length of high quality (start - end)	47 (53 - 99)	571 (82 - 652)
definition	CHROMAT_FILE: MSMg01no504_m06.b1 PHD_FILE: MSMg01no504_m06.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:32:28 2005	CHROMAT_FILE: MSMg01no504_m06.g1 PHD_FILE: MSMg01no504_m06.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:32:28 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	NNNCCATCTATAATTTGCGGTCGCTAAACGACTCANATACCGGAGACGAT CTGCGGAATTCATNGATGCAGGGAGGGAGGGAGGGAGAGTGGAGGGAGGC CACTACTCAGAGTGTATTTTTTCCCCCACGCTGCATCCCTCTTTATACTT TAACTTCTCTCTATCTTTCCACCTCCAGTCTTATTCTTACCCCCCTCTCC CCCCCTTACCTCCCTTTCCCCTCACCCTCCTCTCCTCTCCNNCTCCAACC CTTCGCCCCTTCTTCTCCCCGTTCCCTTATCCCCCCCCCCTTTTTTTCTT CCTTCCCCTCTCTTCTTCCTTTCACTACTCTTTCTCTTCCCTCCCCCTCC CTCTCCACTCCTTTTTTTTTTTTTTCTTTCACCCTTCTCCTCCCCCTCTT CCCCTCTCTTCCTTTTCTCCTTCTTTTTCTCTTCTCTCCCCTTTCCCCTT CCTTTTCCCCAACCCCTCCTCCCCTCCCCCTCCCTCCTTTCCTCCTCCAC CTACTCCCCCATCTCTCTTACTTCTCCCTTTTCTCCCTCCTCTTCCCATT ACTTTCATACTCTTCTTTCCATCCTACCCCCCTCTCCTCCCCACCTATAC TTTACCCTCCTCCCCCCCCCCCTTACCTTCCTACTCTCTTCTCCCTTATT TTCCTGCCCCCCCTTACTCTTTCTCCTCTTCCCCCTTCCTTACATTCCCT CTCTCCTCCTCACCCCTCCCTTTTTATCTCCTCTTCCTTCTTTTTTCCCC CTTTCCCTTAACCCTTCTTATTTCTACCCGCCCTCTTCCCTCCCCTCCCC TTTTCTCTCTCTTTCCTTCCN	NNNNTTCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGACAAGTGTATATAG AAAGACATTTTTATAGGACCCAGTGTCTGTAAAGTTCAGGCCCAAATGCC TAACATGTCTAGGTTTTTTTGTCAGTAATGAGACTGGATAAATGGTATGT AAGTGCTTGCACCCCACTTTTGGAAGATTAATTTACCAAGAAGGAATAAT GGAGCATGGGGTTCAGTTGGTGTTGCTGACAAATATCTCAAAAAAGCCAC AAAGGTGTCTTTGATCGTGACATGTTAGGAAGTGGAGAAGTGTGCTTTGA GTGGTGAGCAGGTCCTGACTCGTGGCTCCTGGAGGGGCTGTGTCTGCTAG TGTGCAGTCTGGGGCTGTTAAGGGACACAGTGGGACAGGCTTGTTTTCAG TGGCTTAGATCTTAAACCACAACATAAAATCTATTTCTGTTAAGCAGCTT CTCTGAAAAATTATCACAGCTCAGAGAGTCCTTCTACGACAAGCTGTGCC ATTTTAAGCTCTTACTTTGAGGGAACTGAAGCATAGCCCCTGCCTACTGC TTGGTGTTCTTTATTTGGGAATCATCCCGCCTAGCACAGAAGCTTGAGTG GTGAGGTCCTCTAGCTGTACTAGAGATTCTGCGCAGGTATCTTATAACAG GCTTGTTATGAAAGTCAGAACCACGCCCTGCCATTTTGGTTTTTTTAATT TTCTTAAAG
quality values	Open. Hide. 0 0 0 3 6 6 6 6 8 8 10 9 9 11 13 27 30 23 13 8 8 8 15 19 23 12 10 10 21 11 12 14 15 8 3 0 3 6 6 6 6 6 10 8 13 6 6 6 7 8 8 8 8 21 29 37 37 37 30 33 19 15 3 0 3 8 7 7 7 9 11 18 23 34 40 40 40 48 48 48 48 48 57 53 50 50 50 50 48 48 48 48 41 41 37 32 20 10 8 8 8 8 8 11 6 8 8 8 12 12 12 11 10 10 8 8 8 10 14 15 14 15 10 10 12 10 10 10 8 8 8 8 9 9 8 8 8 8 10 13 21 19 17 10 11 10 13 10 10 19 12 12 12 9 8 8 8 8 8 8 10 8 6 6 6 8 7 8 8 8 8 8 8 8 12 10 11 11 13 13 21 11 11 8 8 8 8 8 8 8 8 10 11 8 10 8 9 9 10 15 17 9 8 8 8 10 8 8 8 8 8 8 8 10 11 14 10 15 16 14 8 8 8 6 6 10 8 8 8 6 7 6 6 8 6 6 6 8 8 3 0 0 3 7 8 8 10 8 8 8 8 8 8 8 8 9 8 8 6 6 10 15 8 8 8 8 12 8 10 9 9 9 12 11 8 6 6 6 6 6 6 13 13 14 14 12 12 8 8 8 8 10 10 10 11 11 11 8 8 8 8 8 10 11 13 13 10 10 9 10 9 8 9 15 15 10 8 8 6 6 8 8 8 8 8 8 6 6 8 6 9 10 10 11 11 10 15 13 10 10 10 10 9 8 9 10 12 12 10 19 16 10 9 9 10 10 9 11 8 8 8 8 8 12 31 39 37 34 39 39 39 14 12 12 9 9 9 13 11 9 9 8 10 10 8 8 10 8 8 8 8 10 12 20 21 17 10 8 8 8 8 13 13 10 9 12 15 13 8 8 8 8 8 8 8 11 11 11 12 10 12 9 9 9 10 10 10 10 9 9 9 9 9 9 16 9 9 9 9 9 10 15 17 20 23 11 11 7 7 8 8 9 9 10 10 12 13 13 12 8 8 8 12 19 12 12 6 6 8 10 15 12 10 9 9 9 9 9 8 8 8 8 8 8 8 8 8 8 8 6 6 8 12 12 10 8 8 8 9 9 8 8 6 6 8 8 12 18 9 8 8 6 8 6 6 8 8 9 10 9 10 8 8 8 10 8 8 8 10 8 7 7 9 10 13 13 10 10 9 12 10 11 10 8 8 8 8 8 8 8 10 15 15 10 10 8 6 6 8 8 8 8 8 8 8 8 10 10 9 11 9 9 8 8 6 6 6 10 12 8 9 9 10 14 10 9 8 8 8 8 8 8 8 8 8 8 8 8 10 8 6 8 7 6 8 8 10 10 11 11 11 12 13 12 12 12 16 17 17 18 17 14 11 11 10 10 12 18 12 14 19 8 8 8 8 8 8 8 8 8 8 11 11 13 13 10 10 10 10 16 15 12 9 9 9 9 9 17 16 15 11 12 9 11 11 11 11 11 9 8 8 8 8 8 8 8 10 8 8 6 7 8 6 10 8 9 9 10 12 15 10 10 12 12 11 15 8 8 6 6 8 8 9 10 8 13 7 9 8 11 8 8 9 12 10 8 8 8 10 10 16 28 19 22 11 10 8 15 13 13 8 8 8 8 8 8 8 8 9 10 9 9 12 13 19 19 22 19 19 24 23 19 21 10 10 10 10 10 8 9 10 8 10 8 11 12 10 10 8 8 8 9 11 11 9 9 9 13 10 10 9 9 10 10 8 8 9 8 8 8 10 14 10 10 8 8 11 10 8 8 8 8 10 10 8 8 8 8 8 8 8 13 13 15 12 12 10 11 11 3 0	Open. Hide. 0 0 0 0 3 6 6 6 8 8 8 8 8 8 9 15 27 31 34 39 41 37 37 41 37 37 37 37 37 39 37 42 41 39 23 23 9 6 6 8 8 8 8 9 9 9 10 17 15 21 12 24 30 39 44 44 44 39 50 42 59 29 29 9 9 10 8 7 8 9 9 10 16 18 17 14 16 24 29 36 36 57 57 47 42 42 42 43 43 50 50 59 59 59 59 59 57 57 68 68 68 68 59 68 68 68 68 68 68 68 68 68 68 68 68 53 48 40 36 33 36 26 30 36 59 57 57 57 57 57 57 57 68 57 57 46 57 37 57 57 57 57 54 54 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 52 52 43 59 57 68 68 68 68 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 68 68 68 68 68 59 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 59 59 57 59 57 68 68 68 50 51 51 50 50 50 68 68 59 59 48 48 57 57 57 54 54 59 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 54 54 54 54 54 54 68 68 57 57 57 57 57 57 57 57 57 59 59 59 59 59 59 59 59 53 53 50 50 50 50 34 28 19 13 13 10 10 10 12 11 11 11 22 23 32 59 59 59 59 59 50 50 57 57 57 57 59 59 59 59 59 59 59 59 57 57 57 57 57 57 59 59 57 47 47 46 46 54 59 59 59 59 48 48 48 59 59 68 68 68 68 68 68 57 57 57 57 57 68 68 68 68 68 59 59 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 48 48 59 59 59 68 68 68 68 68 68 59 59 57 57 57 57 57 57 57 57 59 59 57 59 57 57 54 57 54 57 59 59 59 59 57 59 59 57 57 68 57 57 57 57 59 59 59 59 39 39 30 44 44 59 59 57 57 57 48 48 54 54 54 54 54 43 43 57 57 57 57 57 57 57 48 59 59 57 48 48 48 59 57 57 57 57 48 48 59 47 59 47 47 47 47 43 44 41 41 37 37 37 37 37 37 39 48 48 48 48 48 48 35 48 30 30 12 25 24 37 37 43 42 42 43 43 32 32 28 40 40 48 48 48 48 59 59 57 59 47 35 35 39 59 59 59 59 59 48 48 48 59 59 59 48 47 47 42 41 39 39 30 25 25 39 39 39 39 39 37 32 25 30 30 25 25 19 19 19 32 32 39 39 39 40 40 41 41 40 40 41 41 41 39 23 22 24 24 22 29 32 37 37 37 32 29 29 35 30 39 34 27 20 19 28 32 30 21 18 21 24 22 18 24 28 28 28 28 28 23 19 14 13 11 11 15 23 23 37 37 28 21 12 12 12 21 17 20 16 13 13 14 13 15 10 10 16 24 13 13 13 16 19 12 12 11 9 9 10 10 10 10 10 10 12 12 9 8 8 6 9 13 13 12 10 9 7 8 8 9 9 9 11 11 8 8 8 8 8 8 10 11 16 16 18 14 15 9 9 9 9 9 9 10 11 11 11 11 12 16 18 11 7 6 6 6 15 7 11 11 12 10 10 14 19 20 14 14 13 17 18 18 16 22 12 10 12 13 11 11 11

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no504_m06.g1 MSMg01no504_m06.g1 CHROMAT_FILE:
MSMg01no504_m06.g1 PHD_FILE: MSMg01no504_m06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:28 2005
         (571 letters)



>mm_chr10_62043491_62044461
          Length = 971

 Score =  948 bits (490), Expect = 0.0
 Identities = 545/572 (95%), Gaps = 17/572 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   tccagacaagtgtatatagaaagacatttttataggacccagtgtctgtaaagttcaggc 60
           |||||||||| |||||||||||||||||||||||||||||||    ||||||||||||||
Sbjct: 927 tccagacaagggtatatagaaagacatttttataggacccag----tgtaaagttcaggc 872

                                                                       
Query: 61  ccaaatgcctaacatgtctaggtttttttgtcagtaatgagactggataaatggtatgta 120
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 871 ccaaatgcctaacatgtctaggtgtttttgtcagtaatgagactggataaatggtatgta 812

                                                                       
Query: 121 agtgcttgcaccccacttttggaagattaatttaccaagaaggaataatggagcatgggg 180
           ||||||||||||||||||||||||||||||||||||||||           |||||||||
Sbjct: 811 agtgcttgcaccccacttttggaagattaatttaccaaga-----------agcatgggg 763

                                                                       
Query: 181 ttcagttggtgttgctgacaaatatctcaaaaaagccacaaaggtgtctttgatcgtgac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 ttcagttggtgttgctgacaaatatctcaaaaaagccacaaaggtgtctttgatcgtgac 703

                                                                       
Query: 241 atgttaggaagtggagaagtgtgctttgagtggtgagcaggtcctgactcgtggctcctg 300
           | || |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 aggtgaggaggtggagaagcgtgctttgagtggtgagcaggtcctgactcgtggctcctg 643

                                                                       
Query: 301 gaggggctgtgtctgctagtgtgcagtctggggctgtt-aagggacacagtgggacaggc 359
           |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 642 gaggggctgtgtctgctagtgtgcagtctggggctgttaaaggggcacagtgggacaggc 583

                                                                       
Query: 360 ttgttttcagtggcttagatcttaaaccacaacataaaatctatttctgttaagcagctt 419
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 582 ttgttttcagtggcttagatcttaaaccacaacgtaaaatctatttctgttaagcagctt 523

                                                                       
Query: 420 ctctgaaaaattatcacagctcagagagtccttctacgacaagctgtgccattttaagct 479
           |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 522 ctctgaaaaattatcacagctcagagagcccttctatgacaagctgtgccattttaagct 463

                                                                       
Query: 480 cttactttgagggaactgaagcatagcccctgcctactgcttggtgttctttatttggga 539
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 462 cttactttgagggaactgaagcatagcccctgcctactgc-tggtgttctttatttggga 404

                                           
Query: 540 atcatcccgcctagcacagaagcttgagtggt 571
           ||||||||||||||||||||||||||||||||
Sbjct: 403 atcatcccgcctagcacagaagcttgagtggt 372


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space:   539121
Effective search space used:   539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information