Query= MSMg01no506_i08.b1 MSMg01no506_i08.b1 CHROMAT_FILE:
MSMg01no506_i08.b1 PHD_FILE: MSMg01no506_i08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:46 2005
(481 letters)
>mm_chr10_6313345_6314225
Length = 881
Score = 857 bits (443), Expect = 0.0
Identities = 470/481 (97%), Gaps = 4/481 (0%)
Strand = Plus / Plus
Query: 1 attctgtttggatgccgaactaggagattataattgaggaagtcggggcctttcttacaa 60
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctgtttggaagatgaactaggagattataattgaggaagtcggggcctttcttacaa 260
Query: 61 accaggaggaagtacccctcatctatgacagatgccggtgaagagttagcacccagagtt 120
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 261 accaggaggaagtacccctcatctatgacagatgccagtgaagagttagcacccagaggt 320
Query: 121 ctgtcactttcaggtggatatcatgcatgtgaagctagaatctggttcaggcttgctgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtcactttcaggtggatatcatgcatgtgaagctagaatctggttcaggcttgctgca 380
Query: 181 tgtgagttcactcttacagatggctggctgtctaccgccacagctcttgcatagcacaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgagttcactcttacagatggctggctgtctaccgccacagctcttgcatagcacaca 440
Query: 241 caaatctctaggttcaagtctcgctactggaagtctcaacctctccccaaacaaacaaac 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 caaatctctaggttcaagtctcgctactggaagtcccaacctctccccaaacaaacaaac 500
Query: 301 aaacaaacaaacaaacaaacaaacccaagttccatttctgttagaatggaccagtgtttc 360
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaacaaacaaacaaacaaac----ccaagttccatttctgttagaatggaccagtgtttc 556
Query: 361 tggctacaggaaaaacaaatgcttgtgccgatgatcttcgagactgaggagagtcatctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tggctacaggaaaaacaaatgcttgtgccgatgatcttcgagactgaggagagtcatctc 616
Query: 421 gaataacgtcctaaccagcataccacagctctcccagtgttctgcaacagtcatagaccc 480
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gaataacatcctaaccagcataccacagctctcccagtgttctgcaacagtcatagaccc 676
Query: 481 a 481
|
Sbjct: 677 a 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space: 410241
Effective search space used: 410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no506_i08.g1 MSMg01no506_i08.g1 CHROMAT_FILE:
MSMg01no506_i08.g1 PHD_FILE: MSMg01no506_i08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:46 2005
(635 letters)
>mm_chr10_6481580_6482614
Length = 1035
Score = 1189 bits (615), Expect = 0.0
Identities = 630/635 (99%)
Strand = Plus / Minus
Query: 1 atctaaattatccttatcccacccccttgcatctgaactgaagtccatattaaattgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 atctaaattatccttatcccacccccttgcatctgaactgaagtccatattaaattgttt 776
Query: 61 ttgcttgtttgcgtttagtttggctttgatctccccttaaagttagtttgaaataaccgg 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ttgcttgtttgcctttagtttggctttgatctccccttaaagttagtttgaaataaccgg 716
Query: 121 agagctcatgttcccgactccctccggggagaaacttccaagcacacactgaatgcttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 agagctcatgttcccgactccctccggggagaaacttccaagcacacactgaatgcttca 656
Query: 181 cactgtaatattcttgtttcttattgtggttctggcgagttgagctggggagaggaataa 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 655 cactgtaatattcttgtttcttattgtggttctggcgagctgagctggggagaggaataa 596
Query: 241 acacttgcagactttgcgctttgcagctgcatcaatgcagcttagcctgaggcgcatggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 acacttgcagactttgcgctttgcagctgcatcaatgcagcttagcctgaggcgcatggc 536
Query: 301 aaccaaagtgaactatggaaatgcagtttgtttgagtgttctgttggtagaaaatacttt 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 535 aaccaaagtgaactatggaaattcagtttgtttgagtgttctgttggtagaaaatacttt 476
Query: 361 tattaaaagaaattactgggatagagaggcagctgggcttgtattcaatgttattatcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tattaaaagaaattactgggatagagaggcagctgggcttgtattcaatgttattatcta 416
Query: 421 ctggaattaactttatactgtcttactaattttctcaactttgtgatgtcgacatttttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ctggaattaactttatactgtcttactaattttctcaactttgtgatgtcgacatttttc 356
Query: 481 atgtgtatagatttcactttatcatattttgtatatgagaatcaaattatgttcatttaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 355 atgtgtatagatttcactttatcatattttgtatatgagaatcaaattatgttcacttaa 296
Query: 541 gatgtttatgtatttgacacagataggcgctgtggttttaattctcttaagtaatttggg 600
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 295 gatgtttatgtatttgacacagataggggctgtggttttaattctcttaagtaatttggg 236
Query: 601 cagattttgaaagctatttgaaaggttattgaaga 635
|||||||||||||||||||||||||||||||||||
Sbjct: 235 cagattttgaaagctatttgaaaggttattgaaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
