Query= MSMg01no507_i16.b1 MSMg01no507_i16.b1 CHROMAT_FILE:
MSMg01no507_i16.b1 PHD_FILE: MSMg01no507_i16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:07 2005
(613 letters)
>mm_chr10_66875039_66876048
Length = 1010
Score = 1110 bits (574), Expect = 0.0
Identities = 600/610 (98%), Gaps = 7/610 (1%)
Strand = Plus / Plus
Query: 5 ggaattctcattatttttctagtcttcactttatgggagcaatctatgtttaaaaattac 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattctcattatttttttagtcttcactttatgggagcaatctatgtttaaaaattac 264
Query: 65 aaaatggagactcatatgccagtaatgttataatacagtagtacttttttttttaaaaac 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 265 aaaatggagactcatatgccagtaatgttataatacagtagtacttttttttttaa---c 321
Query: 125 taacttacttgttttaatgaataaaaaaagacaggcaacattgaaacctgacagtttctt 184
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tagcttacttgttttaatgaataaaaaaagacaggcaacattgaaacctgacagtttctt 381
Query: 185 cttcttcttcttcttcttctttttttt-ttaaatctgtttcctgaaagttttgaacttaa 243
|||||||||||| || || |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 382 cttcttcttcttttt-tt-ttttttttattaaatctgtttcctgaaagttttgaacttaa 439
Query: 244 aaaaaaaatggttgtgctgatttttagacaggaaggtttacatccaaatctattctttgt 303
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaaaaaa-tggttgtgctgatttttagacaggaaggtttacatccaaatctattctttgt 498
Query: 304 ggatgagcagacacttggctgtccagcagtgaggaatcccagggataccatgatgctcac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ggatgagcagacacttggctgtccagcagtgaggaatcccagggataccatgatgctcac 558
Query: 364 tggggaaggttcatggaacgtggcagcaggaagttcctttgagacagtgagagggggaag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tggggaaggttcatggaacgtggcagcaggaagttcctttgagacagtgagagggggaag 618
Query: 424 ttgcatttttaatgggctcagaattcaaagagaatgagagggaacttgttagtttaagag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ttgcatttttaatgggctcagaattcaaagagaatgagagggaacttgttagtttaagag 678
Query: 484 agtagcccaacttagatgaacgctttgagtttgttaaatgtggaaggtttaatttttaaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 agtagcccaacttagatgaacgctttgagtttgttaaatgtggaaggtttaatttttaaa 738
Query: 544 aaaatttattttactacttatttctctgcaggagtatctctgtatgggtttgtgtgcatg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 aaaatttattttactacttatttctctgcaggagtatctctgtatgggtttgtgtgcatg 798
Query: 604 tgtgcagggg 613
||||||||||
Sbjct: 799 tgtgcagggg 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1010
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1000
Effective search space: 603000
Effective search space used: 603000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no507_i16.g1 MSMg01no507_i16.g1 CHROMAT_FILE:
MSMg01no507_i16.g1 PHD_FILE: MSMg01no507_i16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:07 2005
(247 letters)
>mm_chr10_67073671_67074317
Length = 647
Score = 466 bits (241), Expect = e-136
Identities = 244/245 (99%)
Strand = Plus / Minus
Query: 1 tctactaaccagaagaagagccagcctttattggcatataactacttgttaaccaattgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tctactaaccagaagaagagccagcctttattggcatataactacttgttaaccaattgt 256
Query: 61 gccttattaggctgtatgtactatgtcatttccttaaaaatagagatggggggtgggaaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 255 gccttattaggctgtatgtactatgtcatttccttaaaaatagagatggggggtggaaaa 196
Query: 121 tgaaggtgaggaagtaaagtgatttgtccgaggtcacagctaaatactggcaaaagccgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tgaaggtgaggaagtaaagtgatttgtccgaggtcacagctaaatactggcaaaagccgt 136
Query: 181 ttcctcataactagtacccattaccttccatgctataggatgtaccactccggagtaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ttcctcataactagtacccattaccttccatgctataggatgtaccactccggagtaatg 76
Query: 241 tccac 245
|||||
Sbjct: 75 tccac 71
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
