Query= MSMg01no507_n02.b1 MSMg01no507_n02.b1 CHROMAT_FILE:
MSMg01no507_n02.b1 PHD_FILE: MSMg01no507_n02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:29 2005
(687 letters)
>mm_chr10_91796369_91797455
Length = 1087
Score = 785 bits (406), Expect = 0.0
Identities = 428/440 (97%), Gaps = 9/440 (2%)
Strand = Plus / Minus
Query: 248 aaggtcctgagttcaaatcccagcaaccacatggtggcttacaaccatttgttacaaaat 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 aaggtcctgagttcaaatcccagcaaccacatggtggcttacaaccatttgttacaaaat 1028
Query: 308 ctgatgccctcttctggagtgtctgaagacagctacagtgtattcacatataataaataa 367
||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1027 ctgatgccctcttctggagtgtctgaagacagctacagtgtattcacatat--------a 976
Query: 368 ataaataaataaataaataaataaataaataaataaataaataaataaatctttaaaaaa 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 ataaataaataaataaataaataaataaataaataaataaataaataaatctttaaaaaa 916
Query: 428 aaggaatatgtttttttaaaaaaaaaaaagaaaagaaaagaagaaatactggaaacggta 487
|||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 915 aaggaatatg-tttttaaaaaaaaaaaaagaaaagaaaagaagaaatacaggaaacggta 857
Query: 488 gccaagaagcatccaggaaagtctatggaagttaaatcgctgctagagagcttgtcctgc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 gccaagaagcatccaggaaagtctatggaagttaaatcgctgctagagagcttgtcctgc 797
Query: 548 gataaggggtttcatctttctgatacacaccaataccctatatattagagattgggttgt 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 796 gataaggggtttcatctttctgatacacaccaataccctatatattagagattggattgt 737
Query: 608 tgacgaagcagctatgataaagggtgtgattccctagaaatacacatttcttctttcccc 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tgacgaagcagctatgataaagggtgtgattccctagaaatacacatttcttctttcccc 677
Query: 668 tagaaaaagatggaaaagaa 687
||||||||||||||||||||
Sbjct: 676 tagaaaaagatggaaaagaa 657
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space: 729129
Effective search space used: 729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no507_n02.g1 MSMg01no507_n02.g1 CHROMAT_FILE:
MSMg01no507_n02.g1 PHD_FILE: MSMg01no507_n02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:29 2005
(640 letters)
>mm_chr10_91654527_91655566
Length = 1040
Score = 1237 bits (640), Expect = 0.0
Identities = 640/640 (100%)
Strand = Plus / Plus
Query: 1 tcacactccccttgacaaagatgtgtcaagtcatcaccctccttttaatgaacagggaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcacactccccttgacaaagatgtgtcaagtcatcaccctccttttaatgaacagggaaa 260
Query: 61 tgaggacataaacattgagaaacgtggtcaaggctatatacagtgggaagcaagtgtcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaggacataaacattgagaaacgtggtcaaggctatatacagtgggaagcaagtgtcta 320
Query: 121 cacactgaaacacagagtcagaagccatgatttgctatccctcttcctaaggggtggagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacactgaaacacagagtcagaagccatgatttgctatccctcttcctaaggggtggagt 380
Query: 181 tctagatttttgtattgtggtagtttttttttaatatgctaatatttaatatttaaagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctagatttttgtattgtggtagtttttttttaatatgctaatatttaatatttaaagtc 440
Query: 241 aacaaaaatatttttatcagtgatttgcaatttaaaaacatgtttctagtccctgtatcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacaaaaatatttttatcagtgatttgcaatttaaaaacatgtttctagtccctgtatcc 500
Query: 301 attctgggtgttaaaaacaacaaaaagcaggtcatgcccctgaaagactctgattggcgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attctgggtgttaaaaacaacaaaaagcaggtcatgcccctgaaagactctgattggcgc 560
Query: 361 gttctactcaaggactgaaagactctgattggcgcgttctactcaaggaaagccaataag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttctactcaaggactgaaagactctgattggcgcgttctactcaaggaaagccaataag 620
Query: 421 ctaccaagtcctccatcaccttgaccatatcctgggagtctgctgcatcggcggcagtac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctaccaagtcctccatcaccttgaccatatcctgggagtctgctgcatcggcggcagtac 680
Query: 481 atatctaattccacgatctcctgacagcaatttagaagctagggtttttcagccgctcta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atatctaattccacgatctcctgacagcaatttagaagctagggtttttcagccgctcta 740
Query: 541 cttggaaagccctaactgctcaacacatctcaaagaagcacaagaggcccaaataattgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cttggaaagccctaactgctcaacacatctcaaagaagcacaagaggcccaaataattgt 800
Query: 601 ccattgcactgtttggggggcattgtcaatgtcccaaggt 640
||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ccattgcactgtttggggggcattgtcaatgtcccaaggt 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
