Query= MSMg01no508_i15.b1 MSMg01no508_i15.b1 CHROMAT_FILE:
MSMg01no508_i15.b1 PHD_FILE: MSMg01no508_i15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:28 2005
(394 letters)
>mm_chr10_5562469_5563262
Length = 794
Score = 714 bits (369), Expect = 0.0
Identities = 384/389 (98%)
Strand = Plus / Plus
Query: 1 atgtagtcattgtgtcctaatggaaataaagaggatcaaattactatcatttcaggaaat 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 atgtagtcattgtgtcctaatggaaataaagaggatcaaattagtatcatttcaggaaat 260
Query: 61 ataagaggtcaggctcttacccttaattaaggcctcacactattgctttggtggttgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataagaggtcaggctcttacccttaattaaggcctcacactattgctttggtggttgttt 320
Query: 121 gatcaaagcctctccccatcacatgacctgagatgcacagcctacagtgtgtttcgtttt 180
| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 ggtcaaagcctctccccatcacatgacctgagctgcacagcctacagtgtgtttcgtttt 380
Query: 181 gtggtgcaggagatggaggcttggaattctcatgtgctagagaagcgccctgccgctgga 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 gtggtgcaggagatggaggcttggaattctcatgtgctagagaagctccctgccgctgga 440
Query: 241 cagcacccccactctgcagggaaacgccataggacatattcccacgtcaggggaagcctc 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 cagcacccccactctgcagggaaacgccataggacatgttcccacgtcaggggaagcctc 500
Query: 301 tgtggcctttgctttgctttgctttgctttttcatttggtttggtctgagttttatggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtggcctttgctttgctttgctttgctttttcatttggtttggtctgagttttatggga 560
Query: 361 tttctcatgttacacacacacacacacac 389
|||||||||||||||||||||||||||||
Sbjct: 561 tttctcatgttacacacacacacacacac 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 794
Length adjustment: 9
Effective length of query: 385
Effective length of database: 785
Effective search space: 302225
Effective search space used: 302225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no508_i15.g1 MSMg01no508_i15.g1 CHROMAT_FILE:
MSMg01no508_i15.g1 PHD_FILE: MSMg01no508_i15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:28 2005
(549 letters)
>mm_chr10_5600360_5601309
Length = 950
Score = 980 bits (507), Expect = 0.0
Identities = 540/551 (98%), Gaps = 3/551 (0%)
Strand = Plus / Minus
Query: 1 cagggcagggaggggcagtgggtgggggagcaccctcatagaagcagggagagggaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 cagggcagggaggggcagtgggtgggggagcaccctcatagaagcagggagagggaggat 832
Query: 61 ggggtagggggtttcttaggcaggggaactgggaaaggggataacatttgaaatgtaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 ggggtagggggtttcttaggcaggggaactgggaaaggggataacatttgaaatgtaaat 772
Query: 121 aaataaaatatccaatgaaaatatatattgcatgacattctcacacaattaataaaatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 aaataaaatatccaatgaaaatatatattgcatgacattctcacacaattaataaaatct 712
Query: 181 ctatattagtgaatgatctccataccagacactattctgggctttggctatgcatatccg 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 711 ctatattagtgaatgatctccataccagacactattctaggctttggctatgcatatccg 652
Query: 241 attcttctta-tctttttcatttgtctgaacatatatagtccgcatggttcctttgccaa 299
|||||||| | || ||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 651 attcttctaagtcattttcatttgtctgaacatgtatagtccgcatggggcctttgccaa 592
Query: 300 tctctttccttccaacgacccatttgggagtcctcttagatttccttttagctactcttt 359
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 591 tctctttccttccaacgacccatttgggagtcctcttagatttctttttagctactcttt 532
Query: 360 cattttctctatcccaatcttcatataagttgacaaaaaatgcaccccccc-ttcatacc 418
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 531 cattttctctatcccaatcttcatataagttgacaaaaaatgc-ccccccctttcatacc 473
Query: 419 taccactcaccacacccattctccgaccaagagattttggtaggggtggtccacttcccc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 taccactcaccacacccattctccgaccaagagattttggtaggggtggtccacttcccc 413
Query: 479 tcccgaaagtcctctgctcaagcccaaatccatgctagcggtcctctggttggatttctc 538
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 412 tcccgaaagtcctctgctcaagcccaaatccatgcgagcggtcctctggttggatttctc 353
Query: 539 tgtcccatttg 549
|||||||||||
Sbjct: 352 tgtcccatttg 342
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 950
Length adjustment: 10
Effective length of query: 539
Effective length of database: 940
Effective search space: 506660
Effective search space used: 506660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
