NNAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTCAGAAATTTGCATAGGTCTGTAGAACCTAATGAAGCACACCA
AAGAAAACTTGTATTAATTTTCTTCTTGCATATCTAAGCTACACTTGCAC
AGTCCCCCAATCATGCACAGTTTACTTTGTAAAATATGCTGTCTCCCCTT
TAATAATAAATGCAACTACACAACTTCTCAACAATCAGTCAATTACAGTG
AATTTTTAGGATAGCTACTACTAGTAGACTCAATAATATTAATCCCATAG
CCTTAGTGAACATGGATATAATATCTGTTTTGAATATACCTATAGTAGAC
CTTCAACTCCTGAGGCTAATAAGGGCCATGAAACTCTGAAATTCACAATC
CAGCTCTGGCAACCCAATACCCACTTATGACTGATTCTAAATTATAACTA
AACCCCAAAAGACTCCTAAGGAACATCTAAGGAGACGCCAGGGTCCCCTG
AGGGATGTCTTTTACTTGTGGGTTCAATGGCAGAGATAATCTAACATACT
TTACATTACATAGCAACTAGTGGGAGCTTTTACCAATTTTTTCTTCTTCT
TTTCTCAGGATCCAACTTCTATTTCTTCTGGTGTAGATAGTGAAGGGAAA
GTACATCAGAGAGTTACATGACTAAGGAAGGGNTTTTGTTTTTTGTTTTT
TTGTTTTTGTTTTTGTTTTTTTTTTTCAGGATGACGGCAACAACATAAAA
GCTGAACCCAA

NNNNNCCCTATGATATGGGTAGGTCTGGCGGCCGNCCGGCCTCANAAACC
TAGGNNGAANNANAGAAGGATTCCCGAAATACTAGCCAGAGCAATTAGAC
AACAAAAGGAGATCAAGGGGATACAAATTGGAAAGCAAGAATTCAAAATA
TCACTCTTTGGCAATGACATGTTTGTGTACATGAGTGACCCCAAAATTCT
ACCAGAGAACTCCTTCAGCTGACACATAACTTCACCAAAGTGGCTGAATA
TAAAACTAACTCAAACAAATCATCAGCCTTCCTACACTGAAAGGATAAAC
AGGCTGAGAAGGAATTAGGGGAATGACACCCTTTATTTTATTCACAAATA
AAATATGTTGGTGTGACTCTAACCAGGCAAGTGAAAGATATATATGACAA
GAACTTCAAGTCTCTGAAGAAAGAAATTGAACAAGACCTCAGAAGATGGA
AAGATCTCCAATGCTCATGGCAGGGTTAACATAGTAAAAATGGCCGTCTT
ACCAAAAGCAATCTACAGATTCAATTCAATACCCATCAAAATTCCAACTC
AATTCTGCACAGAGATGGAAAGAACAGTTCTCAAAATCATTTGGAGCAGC
AAAAACCCTAGGATAATGAAACTATTCTCTACCTCAGAGCAAAAGTGATA
AAAACAGCATGGTACAGAGACAGCATGTGGATCAGTGCAATAGAATTGAA
GAACCAGAGCATCAGCGGCAGACATCTTGGGTCCGGCACTCCGCCGAGAG
TATTCTGCACAGGTGAGAGTGTG

Query= MSMg01no508_p21.b1 MSMg01no508_p21.b1 CHROMAT_FILE:
MSMg01no508_p21.b1 PHD_FILE: MSMg01no508_p21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:05 2005
         (685 letters)



>mm_chr10_14660878_14661962
          Length = 1085

 Score = 1255 bits (649), Expect = 0.0
 Identities = 674/685 (98%), Gaps = 7/685 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   aggtctgtagaacctaatgaagcacaccaaagaaaacttgtattaattttcttcttgcat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 aggtctgtagaacctaatgaagcacaccaaagaaaacttgtattaattttcttcttgcat 751

                                                                       
Query: 61  atctaagctacacttgcacagtcccccaatcatgcacagtttactttgtaaaatatgctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 atctaagctacacttgcacagtcccccaatcatgcacagtttactttgtaaaatatgctg 691

                                                                       
Query: 121 tctcccctttaataataaatgcaactacacaacttctcaacaatcagtcaattacagtga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tctcccctttaataataaatgcaactacacaacttctcaacaatcagtcaattacagtga 631

                                                                       
Query: 181 atttttaggatagctactactagtagactcaataatattaatcccatagccttagtgaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 630 atttttaggatagctactactagtagactcaataatattaatcccatagccttagtgaat 571

                                                                       
Query: 241 atggatataatatctgttttgaatatacctatagtagaccttcaactcctgaggctaata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 atggatataatatctgttttgaatatacctatagtagaccttcaactcctgaggctaata 511

                                                                       
Query: 301 agggccatgaaactctgaaattcacaatccagctctggcaacccaatacccacttatgac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 agggccatgaaactctgaaattcacaatccagctctggcaacccaatacccacttatgac 451

                                                                       
Query: 361 tgattctaaattataactaaaccccaaaagactcctaaggaacatctaaggagacgccag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tgattctaaattataactaaaccccaaaagactcctaaggaacatctaaggagacgccag 391

                                                                       
Query: 421 ggtcccctgagggatgtcttttacttgtgggttcaatggcagagataatctaacatactt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ggtcccctgagggatgtcttttacttgtgggttcaatggcagagataatctaacatactt 331

                                                                       
Query: 481 tacattacatagcaactagtgggagcttttaccaattttttcttcttcttttctcaggat 540
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 330 tacattacatagcaactagtgggagcttttaccaattgtttcttcttcttttctcaggat 271

                                                                       
Query: 541 ccaacttctatttcttctggtgtagatagtgaagggaaagtacatcagagagttacatga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ccaacttctatttcttctggtgtagatagtgaagggaaagtacatcagagagttacatga 211

                                                                       
Query: 601 ctaaggaagggnttttgttttttgtttttttgtttttgtttttgtttttttttttcagga 660
           ||||||||||| |||||||||||| ||||||  ||||||| ||||||||||    |||||
Sbjct: 210 ctaaggaaggg-ttttgttttttggtttttt--ttttgttgttgttttttt----cagga 158

                                    
Query: 661 tgacggcaacaacataaaagctgaa 685
           |||||||||||||||||||||||||
Sbjct: 157 tgacggcaacaacataaaagctgaa 133


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space:   725625
Effective search space used:   725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)