CCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNGNGG
AATTCTCCAATTGCCACTTTTTTTTAACCATGATTTTATCTGCTTTAGAG
AGACTTGTTATTTCAAAGAATTGCAATTTTCTCCTTGGTGCCTGGTTTGA
GAACATGGATTTACTCGACTGTCATATGCAATTGCTGAATTTCTATGGCT
TTTTAAGTGACAACGGTATTCATATATGCAGAAAGAATGAAAGTGGGCTT
GCAAAATGATGTCTCGGTCCATGTGTTGTTTTTGTTCCCTTAGCTGTATG
AAAGCTGCCTTGTCATGATAAGTCTTAATTGTAATAATTCTTTAGAAGAA
CTCCATGGTGTCTTTTAGGCAGCACTGCTATTTAAGGCTTTGCTTGTGCC
CTCGCCAAACAGATGTGTTTATTTACATGTCTGTTCTAATCAGGAGGATA
AAAGAGACTCTGCTCAGAGCGTTGTACTTCTCCTAATACAAGATAAAAGG
GGAGGAGAGATATGCACAGTCAAAATAAGAGTGAAAAAAAAAAAAGCCTG
TGGATGTGACTCAAGCTAAGCAGCTGTGTGCTCCCAACTCTGTACTGTCA
CAGCTGTGTGTGGGCTGACATGAGCAGGAAGGAAGAGTTAGCTGGTGGCA
CTGGTTTGGGGGGCAGTGGTTTTTTCTCCTTCATGTATCTGGGAACAGAT
CCGTGATTGTCTTTCCTGTACTGAGATGTCATTGCCAAGGTTCCTTTGTC

ACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTAAACCTGATAAACTGATCCAGT
GAACTAGCTGCATATAAAATTAACTCAAACAAATCAGTGGACTTTCTTTA
TACAAAGGATAAACAGGATGAGAAAGAAATTAGGGAAACAACACCCTTCA
CAATAATCACAAATAATATAAAATACCTTGGTGTGACTCTAACTAAGGAA
GTGCAAGATCTGTATGGTAAGAACTTCAAAACTCTGAAGAAAGGAATTGA
AGAAGATCTCAGAAGATGTTTTGATCTCCTATGCTCATGGATTGGCAGGA
TTAACATAATTAAAATGGTTACCTTGCCAAAATCAATCTACAAATTCAAT
GCAATCTCCATCAAAATTCCAACTCAATTCTTCACTGAGATAGAAAGTGC
AATTTGTAGGGGCAGGAAATCCCAGATCTTCAGAAAAACCCAACCAAATG
TCAAAGGTGTTAGCCCTGGGGGAGGACAGCACCTAGGGAGGACAGGGTTT
AGACTCCCTCCCTGAACCCAGGGTAATTCTGAGAGTAGAGGTAAAACCCA
CTCAATTTGTGGTGGACACAAGGGCTCAATACTTGGACCCCCTCCAAGAA
AATGGCCCCGTTTCTAAGAAAAAAATCTTGGGTCTAAGGAGCCACTGATA
CCAAAATGTATTCATGGACTACCCAAAGAATAGTGGACATAGGAATGGGC
CAGGTATCCCC

Query= MSMg01no509_d13.b1 MSMg01no509_d13.b1 CHROMAT_FILE:
MSMg01no509_d13.b1 PHD_FILE: MSMg01no509_d13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:24 2005
         (646 letters)



>mm_chr10_54271276_54272319
          Length = 1044

 Score = 1183 bits (612), Expect = 0.0
 Identities = 627/632 (99%), Gaps = 2/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 15  acttttttttaaccatgattttatctgctttagagagacttgttatttcaaagaattgca 74
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 acttttttttaaccatgattttatctgctttagagagacttgttatttcaaagaattgca 274

                                                                       
Query: 75  attttctccttggtgcctggtttgagaacatggatttactcgactgtcatatgcaattgc 134
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 attttctccttggtgcctggtttgagaacatggatttactcgactgtcatatgcaattgc 334

                                                                       
Query: 135 tgaatttctatggctttttaagtgacaacggtattcatatatgcagaaagaatgaaagtg 194
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 335 tgaatttctatggctttttaagtgacaacggtattcatatatgcagaaagaa-gaaagtg 393

                                                                       
Query: 195 ggcttgcaaaatgatgtctcggtccatgtgttgtttttgttcccttagctgtatgaaagc 254
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ggcttgcaaaatgatgtctcggtccatgtgttgtttttgttcccttagctgtatgaaagc 453

                                                                       
Query: 255 tgccttgtcatgataagtcttaattgtaataattctttagaagaactccatggtgtcttt 314
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tgccttgtcatgagaagtcttaattgtaataattctttagaagaactccatggtgtcttt 513

                                                                       
Query: 315 taggcagcactgctatttaaggctttgcttgtgccctcgccaaacagatgtgtttattta 374
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 taggcagcactgctatttaaggctttgcttgtgccctcgccaaacagatgtgtttattta 573

                                                                       
Query: 375 catgtctgttctaatcaggaggataaaagagactctgctcagagcgttgtacttctccta 434
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 574 catgtctgttctaatcaggaggataaaagagactctgctcagagctttgtacttctccta 633

                                                                       
Query: 435 atacaagataaaaggggaggagagatatgcacagtcaaaataagagtgaaaaaaaaaaaa 494
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 634 atacaagataaaaggggaggagagatatgcacagtcaaaataagagtgaaaaaaaaaaa- 692

                                                                       
Query: 495 gcctgtggatgtgactcaagctaagcagctgtgtgctcccaactctgtactgtcacagct 554
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 gcctgtggatgtgactcaagctaagcagctgtgtgctcccaactctgtactgtcacagct 752

                                                                       
Query: 555 gtgtgtgggctgacatgagcaggaaggaagagttagctggtggcactggtttggggggca 614
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 753 gtgtgtgggctgacatgagcaggaaggaagagttagctggtggcactggtttgggggcca 812

                                           
Query: 615 gtggttttttctccttcatgtatctgggaaca 646
           ||||||||||||||||||||||||||||||||
Sbjct: 813 gtggttttttctccttcatgtatctgggaaca 844


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1044
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1034
Effective search space:   657624
Effective search space used:   657624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)