Query= MSMg01no509_g04.b1 MSMg01no509_g04.b1 CHROMAT_FILE:
MSMg01no509_g04.b1 PHD_FILE: MSMg01no509_g04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:36 2005
(683 letters)
>mm_chr10_101300965_101302047
Length = 1083
Score = 1044 bits (540), Expect = 0.0
Identities = 579/592 (97%)
Strand = Plus / Minus
Query: 92 ttagattcaaaattaaagacagaaaaaagaacaaaaataatccattaactagataagtta 151
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 ttagattcaaaattaaagacaaaaaaaagaacaaaaataatccattaactagataagtta 1024
Query: 152 ctaacttacaacattaaattcattattagttaaaagaataaagtctaaacttttatttaa 211
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1023 ttaacttataacattaaattcattattagttaaaataataaagtctaaacttttatttaa 964
Query: 212 accagtgactattaagtatgttgcctgacttagaggttatatgtacatgattcctccttt 271
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 963 accagtgactattaagtatgttgcctgacttagaggttatatgcacatgattcctccttt 904
Query: 272 tttttaatttaaaaataattcacctcaatttctttcccaaaattacattttttaaaaaca 331
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 tttttaatttaaaaataatacacctcaatttctttcccaaaattacattttttaaaaaca 844
Query: 332 gcacagttaaaataaatcaatatattttcaaaaagcatattacacaatgtttttagctta 391
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 gcacagttaaaataaatcagtatattttcaaaaagcatattacacaatgtttttagctta 784
Query: 392 ttaacctatttttcaacaacactgtaaaatgggacctttaaattgtagcttagctctggt 451
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 783 ttaacctatttttcaacaacactgtaaaatgggacctttaagttgtagcttagctctggt 724
Query: 452 ggcatgatccacataagtaattccagcgatgaagactgataatctagtaggatacaagaa 511
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 723 ggcatgatccacataagtaattccagcgatgaagactgataaactagtaggatacaagga 664
Query: 512 tagtatcatttttgacctgtgctacatagttaaattttgtcttagaaaccaaaccaacac 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 663 tagtatcatttttgacctgtgctacatagttaaattttgtcttagaaaccaaaccaatac 604
Query: 572 cactctgaagtcaaactatgcagtgtttgaagtcaaaagcaaatcacagatcttaggatg 631
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 cactctgaaggcaaactatgcagtgtttgaagtcaaaagcaaatcacagatcttaggatg 544
Query: 632 attttctttcttttaacattcaatgactaaaaataaatctttattatatatt 683
|||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 543 attttctttcttttaacattcaatgactaagaataaatctttattatatatt 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space: 722129
Effective search space used: 722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no509_g04.g1 MSMg01no509_g04.g1 CHROMAT_FILE:
MSMg01no509_g04.g1 PHD_FILE: MSMg01no509_g04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:36 2005
(583 letters)
>mm_chr10_101167514_101168496
Length = 983
Score = 988 bits (511), Expect = 0.0
Identities = 568/593 (95%), Gaps = 10/593 (1%)
Strand = Plus / Plus
Query: 1 ataagtaaacatcgtaaatcattaagatcaagatggaagaaactcaattcataagaagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ataagtaaacatcgtaaatcattaagatcaagatggaagaaactcaattcataagaagca 250
Query: 61 tcaccaaattctaaaaattgccattatttttaaaaccatattattttcattttgaattgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 251 tcaccaaattctaaaaattgccattatttttaaaaccatattattttcatttttaattgt 310
Query: 121 gtgtatctgtgtgtatctgtgagtggttatgtacaattgggaggagggtcaccctgaggc 180
|||||| ||||||||| ||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 311 gtgtatatgtgtgtatttgtgagtggttatgtacaattgggaggagcatcacactgaggc 370
Query: 181 cagaacatcaggtttctgggaactgcatccatatgcagctatgagacctctgatatgagt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aagaacatcaggtttctgggaactgcatccatatgcagctatgagacctctgatatgagt 430
Query: 241 gcttattatgtcagaaataacttatacttatttttctcaaatgcatggaaacaactaata 300
||| | | ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gctgaaaacgtcagaaatgacttatacttatttttctcaaatgcatggaaacaactaata 490
Query: 301 aaagataattcaaatgttaaaaagaacaaggaataatatacagtctaaactcctggctgt 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 491 aaagataattcaaatgttaaaaagaacaaggaataatatgcagtctaaactcctggctgt 550
Query: 361 ctctttagcattctctgtgatataagactgaatgatttctttctaagtttgagaaaaaaa 420
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ctctgtaacattctctgtgatataagactgaatgatttctttctaagtttgagaaaaaaa 610
Query: 421 cactgtggtgttttgttttgttgtgtt----------ttgttttgttttgttttgtttta 470
||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 611 cactgtggtgttttgttttgttgtgttgtgttttgttttgttttgttttgttttgtttta 670
Query: 471 ccctaatgctagaaatactagccactttaaaagggactaacttaaaattagaagataaaa 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ccctaatgctagaaatactagccactttaaaagggactaacttaaaattagaagataaaa 730
Query: 531 cattgaaaagaaaaatcaaaggaatcattatgtagactacactattatctacc 583
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 cattgaaaagaaaaatcaaaggaatcattatgtagactacactattatctacc 783
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
