Query= MSMg01no512_c09.b1 MSMg01no512_c09.b1 CHROMAT_FILE:
MSMg01no512_c09.b1 PHD_FILE: MSMg01no512_c09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:12 2005
(675 letters)
>mm_chr10_25462470_25463545
Length = 1076
Score = 1226 bits (634), Expect = 0.0
Identities = 661/670 (98%), Gaps = 1/670 (0%)
Strand = Plus / Plus
Query: 7 gaattctacattatcaaaaaaaaaatcacatttgagccctgttgctaggcaagttgaagg 66
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctacagaataaaaaaaaaaatcacatttgagccctgttgctaggcaagttgaagg 266
Query: 67 cagctgtgctcagagtctttgacagcaggacattctgctcggtgctgtgcagtgaatgcc 126
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 267 cagctgtgctcagagtctttgacagcaggacattgtgctcggtgctgtgcagtgaatgcc 326
Query: 127 agcatctcttcataggagtggagcttattatcaaaaataccaggagagcaggtctctaca 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 agcatctcttcataggagtggagcttattatcaaaaataccaggagagcaggtctctaca 386
Query: 187 aatgctctggaggtgtacacacacaaacacggggacagacacatagtaagatcccctgtc 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aatgctctggaggtgtacacacacaaacacggggacagacacatagtaagatcccctgtc 446
Query: 247 cccttcagtcaaagctttcctactctcttcaaaacaacaaattgcagcaagcaggagaat 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 cccttcagtcaaagctttcctactctcttcaaaacaacaaattgcagcaagcaggagaat 506
Query: 307 agcaacagctgccattgtgcattgctgcttttcattactgagaaaggagggagcagtatt 366
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 507 agcaacagctgccattgtgcgttgctgcttttcattactgagaaaggagggagcagtagt 566
Query: 367 cagtataataac-ttagtctgattaaggcttttgttcatagggaagaaaactctctacag 425
|||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 567 cagtataataacattagtctgattaaggcttttgttcatagggaggaaaactctgtacag 626
Query: 426 gtcaggcaagacgtctgctcaagatgacatcactgataagagcatctttaaaacaaacat 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gtcaggcaagacgtctgctcaagatgacatcactgataagagcatctttaaaacaaacat 686
Query: 486 aggagttattcattggtagcattttatttatcaggtattttgtgtggagggaaagccatt 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 aggagttattcattggtagcattttatttatcaggtattttgtgtggagggaaagccatt 746
Query: 546 tattgagtattgtataattgatcaggtgtaattgattgttgggtgtgggggtgataggcc 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tattgagtattgtataattgatcaggtgtaattgattgttgggtgtgggggtgataggcc 806
Query: 606 agtttctggattctctgttaggtgtgtgatcataggcaaatttcctcagagttctaaatc 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 agtttctggattctctgttaggtgtgtgatcataggcaaatttcctcagagttctaaatc 866
Query: 666 tttccccatg 675
||||||||||
Sbjct: 867 tttccccatg 876
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1076
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1066
Effective search space: 708890
Effective search space used: 708890
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no512_c09.g1 MSMg01no512_c09.g1 CHROMAT_FILE:
MSMg01no512_c09.g1 PHD_FILE: MSMg01no512_c09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:12 2005
(642 letters)
>mm_chr10_25624277_25625318
Length = 1042
Score = 1164 bits (602), Expect = 0.0
Identities = 631/642 (98%), Gaps = 4/642 (0%)
Strand = Plus / Minus
Query: 1 acagaaattttaatgtgcagggatcaaaggcaggtatgtgccacaacacttggccactgg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 970 acagaaattttaatgtgcagggatcaaaggcaggtatgtgccacaacacttggcaactgg 911
Query: 61 acaaataaatgttgaattgcaatgtttgactttattcatcgctgtacttcttgttttgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 acaaataaatgttgaattgcaatgtttgactttattcatcgctgtacttcttgttttgtt 851
Query: 121 ttgttttgtttttttctccctccctttttcagagcaaggtcacagagacattctctaaca 180
|||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 850 ---tttt-tttttttctccctccccttttcagagcaaggtcacagagacattctctaaca 795
Query: 181 cctataaatttaattttcttgttacttttcactttgagtatttcattttcttggaattca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 cctataaatttaattttcttgttacttttcactttgagtatttcattttcttggaattca 735
Query: 241 ctcatgtacggagtttgaaatagagatccaagctcacactgacctggtcaaattcatttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ctcatgtacggagtttgaaatagagatccaagctcacactgacctggtcaaattcatttg 675
Query: 301 catactggttcatccctgcgctgatagccactgacttctatccttcaataactgatattc 360
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 674 catactggttcatccctgagctgatagccactgacttctatccttcaataaccgatattc 615
Query: 361 ttatttctggtagaactggtcactgcttattgacaattttagtgtcactttctagagcaa 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 614 ttatttctggtagaactggtcactgtttattgacaattttagtgtcactttctagagcaa 555
Query: 421 acaactgactgttgcaaaacttcaaggaaggttttggacttcctgagtgctttcaagtta 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 554 acaactgactgttgcaaaacttcaaggaaggttttggactccctgagtgctttcaagtta 495
Query: 481 atgagctaagtatggtgtggtgcagaagatgccaactagttggctggggctatgggaagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 atgagctaagtatggtgtggtgcagaagatgccaactagttggctggggctatgggaagc 435
Query: 541 agtgccagaaatcacaaactctgagggtgagtttcctcaccagtgacacgaatttactca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 agtgccagaaatcacaaactctgagggtgagtttcctcaccagtgacacgaatttactca 375
Query: 601 caagtttgtaaaaaatgctattttgaggtaggaaaggcatca 642
| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 cgagtttgtaaaaaatgctattttgaggtaggaaaggcatca 333
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
