Query= MSMg01no514_d11.b1 MSMg01no514_d11.b1 CHROMAT_FILE:
MSMg01no514_d11.b1 PHD_FILE: MSMg01no514_d11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:01 2005
(656 letters)
>mm_chr10_59728173_59729228
Length = 1056
Score = 375 bits (194), Expect = e-108
Identities = 215/224 (95%), Gaps = 5/224 (2%)
Strand = Plus / Minus
Query: 1 atggaaactctctcctgccctcctagaaccgaagcagatgcatcactataaagtttgagg 60
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 371 atggaaactctctcctgccctcctagaaccgaagcagatggatcactatgaagtttgagg 312
Query: 61 tcaccctgagctacattgcatgaccctacctcaaaatggaagcaaaaagaactggaagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tcaccctgagctacattgcatgaccctacctcaaaatggaagcaaaaagaactggaagta 252
Query: 121 taacccagtggtagaacaagtgcctagcgtgtttcaaaagctttagattcaacacacaca 180
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 taacccagtggtagaacacttgcctagcgtgtttcaaaagctttagattcaacacacaca 192
Query: 181 cacatacacacacacacactacacatgcacacaccacacacaca 224
||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 191 cacatacacacacacacac-acacat----acaccacacacaca 153
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_d11.g1 MSMg01no514_d11.g1 CHROMAT_FILE:
MSMg01no514_d11.g1 PHD_FILE: MSMg01no514_d11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:01 2005
(562 letters)
>mm_chr10_59553662_59554617
Length = 956
Score = 913 bits (472), Expect = 0.0
Identities = 495/506 (97%), Gaps = 6/506 (1%)
Strand = Plus / Plus
Query: 1 agtggagcaatttagttcatttattctcattctctcccaaaattcaattacaaattttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtggagcaatttagttcatttattctcattctctcccaaaattcaattacaaattttca 260
Query: 61 gctgagctccagtcagctgacccatgaaccaggttcaggggaagagctcactgtgcaagc 120
||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 gctgagctccagtcagctgacccatgaaccagg------ggaagagctcactgtgcaagc 314
Query: 121 catgtgttagcttttgaaggttaggctaggccttcccgagacctctcttaagggggagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 catgtgttagcttttgaaggttaggctaggccttcccgagacctctcttaagggggagct 374
Query: 181 gcccacagcgagagattaaatagctatctgaagggagcctcgattctctaccttacatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gcccacagcgagagattaaatagctatctgaagggagcctcgattctctaccttacatga 434
Query: 241 caggaaaagatcgatgtctctcctctcactaggcccttaccaaactggaaccttttcctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 caggaaaagatcgatgtctctcctctcactaggcccttaccaaactggaaccttttcctc 494
Query: 301 tggggactaaggagccagcaacagaactacattcagcagtgagcaagcagattcttagcc 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tggggactgaggagccagcaacagaactacattcagcagtgagcaagcagattcttagcc 554
Query: 361 aagatgggagaattgtaagatcaacttacaagtccacctccccacccattagggagcagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 aagatgggagaattgtaagatcaacttacaagtccacctccccacccattagggagcagg 614
Query: 421 agggcacagatgtgaaggactggggcgtactaccaaagaggaagaacgctcttatctctc 480
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||
Sbjct: 615 agggcacagatgtgaaggactggggcgtgctaccaaaggggaagaacgctcttatgtctc 674
Query: 481 ctgggcacccatcaagatcgcccagg 506
||||| ||||||||||||||||||||
Sbjct: 675 ctgggtacccatcaagatcgcccagg 700
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 956
Length adjustment: 10
Effective length of query: 552
Effective length of database: 946
Effective search space: 522192
Effective search space used: 522192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
