Query= MSMg01no514_i21.b1 MSMg01no514_i21.b1 CHROMAT_FILE:
MSMg01no514_i21.b1 PHD_FILE: MSMg01no514_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:30 2005
(384 letters)
>mm_chr10_53106053_53106836
Length = 784
Score = 563 bits (291), Expect = e-165
Identities = 354/383 (92%), Gaps = 24/383 (6%)
Strand = Plus / Minus
Query: 1 gtgacatgttcctgaaaatactttaaatagtaacaactttaaaaaattgtgactgagctg 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gtgacatgctcctgaaaatactttaaatagtaacaactttaaaaaattgtgactgagctg 361
Query: 61 ccaggccctgctcagtcaggagtaggcagaaccttcttcccaggagttcatggacaacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ccaggccctgctcagtcaggagtaggcagaaccttcttcccaggagttcatggacaacag 301
Query: 121 tctgtcatctctcctgagcctgtttgcttctgttggaaatttcaggaactcttttctgct 180
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 300 tctgtcatctctcctgagcctgcctgcttctgttggaaatttcaggaactcttttctgct 241
Query: 181 cctggtatctctggctctgctgtagttgctgtgagctgcatttcttttctcttcttttct 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 240 cctggtatctctggctctgctgtagttgctgtgagctgcatttctttt---ttcttttct 184
Query: 241 ttccttttctttcctttccttttcttttcttttcttttcttttcttttcttttcttttct 300
|| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tttcttttcttt----------tcttttcttttcttttcttttcttttcttttcttttct 134
Query: 301 tttcttttcttttcttttcttttcttttttctctt--ttctctttcttctcttctcttct 358
||||||||||||||||||||||||||||||| ||| ||| ||| |||| |||| ||||
Sbjct: 133 tttcttttcttttcttttcttttcttttttc-cttccttc-cttccttc-cttc-cttc- 79
Query: 359 cttctcttctcttctcttctctt 381
|||| |||| |||| ||| ||||
Sbjct: 78 cttc-cttc-cttc-ctt-tctt 60
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 72
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_i21.g1 MSMg01no514_i21.g1 CHROMAT_FILE:
MSMg01no514_i21.g1 PHD_FILE: MSMg01no514_i21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:30 2005
(502 letters)
>mm_chr10_52984126_52985027
Length = 902
Score = 920 bits (476), Expect = 0.0
Identities = 495/502 (98%), Gaps = 2/502 (0%)
Strand = Plus / Plus
Query: 1 caggctcttcctggacatgttcttaccctgagaaaggaagctgaacctgtaatctagaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 caggctcttcctggacatgttcttaccctgagaaaggaagctgaacctgtaatctagaca 262
Query: 61 agggttatgtgacattcctcaggcagagggtgtgtggctccctagatcaggcagagatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agggttatgtgacattcctcaggcagagggtgtgtggctccctagatcaggcagagatga 322
Query: 121 ggaagtccctctaagaaaagggagtccttactgcactgagcttgagaaagctccagacat 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 323 ggaagcccctctaagaaaagggagtccttactgcactgagcttgagaaagctc--gacat 380
Query: 181 ggaagactgtctttcagcagcaggacccaacatagagcattctttcagaaatgatcgcta 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaagactgtctttcagcagcagggcccaacatagagcattctttcagaaatgatcgcta 440
Query: 241 tccaaggaatagatagcagaaatatgtaaatgtggttacatttcatctaatgtattcaat 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 tccaaggaatagatagcagaaatatgtaaatgcggttacatttcatctaatgtattcaat 500
Query: 301 tttaagtaaaagttgaaggcatctttaccccttgaaagtgacaaaatatttcataaaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttaagtaaaagttgaaggcatctttaccccttgaaagtgacaaaatatttcataaaatg 560
Query: 361 tcataaatgtatgaaagtcgttttagaaaaataaattttgactcatataaatataaacta 420
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 561 tcataaatgtatgaaagtcgttttagaaaaataaattttgactcacataaatataaacta 620
Query: 421 tacataaaatgcagtttcaaaactcatagaattgttcaaaaatatatgataatatgtatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tacataaaatgcagtttcaaaactcatagaattgttcaaaaatatatgataatatgtatt 680
Query: 481 tttctacaattaacagaaccat 502
|||| |||||||||||||||||
Sbjct: 681 tttccacaattaacagaaccat 702
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
