Query= MSMg01no516_p05.b1 MSMg01no516_p05.b1 CHROMAT_FILE:
MSMg01no516_p05.b1 PHD_FILE: MSMg01no516_p05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:52 2005
(693 letters)
>mm_chr10_30914171_30915262
Length = 1092
Score = 1216 bits (629), Expect = 0.0
Identities = 644/649 (99%), Gaps = 1/649 (0%)
Strand = Plus / Minus
Query: 5 gaattcagacaagacacacagagcagagtttattatgagactatatagggcactctcaag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 gaattcagacaagacacacagagcagagtttattatgagactatatagggcactctcaag 589
Query: 65 ggtaagagttgacaaagtcattttgacaactgtagaggaatatactgtcaaaggatgaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 ggtaagagttgacaaagtcattttgacaactgtagaggaatatactgtcaaaggatgaga 529
Query: 125 aaagacaatggctaaaggggccactgcaccaacctacatgttaagaaggctttgctttct 184
|| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 528 aaggacaatggctaaaggggccactgcaccaacctacatgttaagtaggctttgctttct 469
Query: 185 actaattaaaaatttctatgatagaaatctttcctgaggcatattttcttgccctactta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 actaattaaaaatttctatgatagaaatctttcctgaggcatattttcttgccctactta 409
Query: 245 gattaactcttaagagacaaggcaagacaatctcttttctttactagaaaacctctgatg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gattaactcttaagagacaaggcaagacaatctcttttctttactagaaaacctctgatg 349
Query: 305 agaaaataatttgtattatcttttgagccagtatgcaagaccctactcatggtgagacat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 agaaaataatttgtattatcttttgagccagtatgcaagaccctactcatggtgagacat 289
Query: 365 aaaactcttctttccatgccttgtcttctgaggaagaggttgatgcccagggcattaaag 424
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 aaaactc-tctttccatgccttgtcttctgaggaagaggttgatgcccagggcattaaag 230
Query: 425 attgctatttttgttcttcctttaatttattctttgaaattttatacatatataatatat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 attgctatttttgttcttcctttaatttattctttgaaattttatacatatataatatat 170
Query: 485 tctggccatgctcatattcattctctctcccttatcttcctcttgttcccaccaactttc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 tctggccatgctcatattcattctctctcccttatcttcctcttgttcccaccaactttc 110
Query: 545 tctctcttctttctgccaagtccctcatcctgctttttacatcttggttgttttgctttg 604
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 109 tctctcttctttctgccaagtccctcatcccgctttttacatcttggttgttttgctttg 50
Query: 605 tgccctcttgcatttaatggatccactctcgtgtgaggctatatccatt 653
||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 tgctctcttgcatttaatggatccactctcgtgtgaggctatatccatt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1092
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1082
Effective search space: 739006
Effective search space used: 739006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no516_p05.g1 MSMg01no516_p05.g1 CHROMAT_FILE:
MSMg01no516_p05.g1 PHD_FILE: MSMg01no516_p05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:52 2005
(650 letters)
>mm_chr10_30744807_30745856
Length = 1050
Score = 1203 bits (622), Expect = 0.0
Identities = 643/650 (98%)
Strand = Plus / Plus
Query: 1 ataagaaattcaaagatgagacaaattttttgtttaattcaaggtgggtgggtgccaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataagaaattcaaagatgagacaaattttttgtttaattcaaggtgggtgggtgccaaca 260
Query: 61 aggtgatttgtagtgtgatatccaaaagggacatcagaacatgttgatgtgggaatacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtgatttgtagtgtgatatccaaaagggacatcagaacatgttgatgtgggaatacag 320
Query: 121 tttactagccctctaatatgcttttcatcatggacaaaaacactgtggtacttcctagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttactagccctctaatatgcttttcatcatggacaaaaacactgtggtacttcctagag 380
Query: 181 gcagatatctttgtcaaagcagagtcaactctggtgtcctggtcactcactcaaaccttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcagatatctttgtcaaagcagagtcaactctggtgtcctggtcactcactcaaaccttg 440
Query: 241 gagtgagcggatagatagaagacaagctcaggatggaattacctgaatgtactcagtttc 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 gagtgagcggatagatagaagacaagctcaggacggaattacctgaatgtactcagtttc 500
Query: 301 agattttgcaatacatacctccactttgctcaagtccaacatgaagctactgccatagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agattttgcaatacatacctccactttgctcaagtccaacatgaagctactgccatagac 560
Query: 361 aagagtgttgatagctttcaaagtgataataaattgaaagatcaaagaatcttcttcata 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagagtattgatagctttcaaagtgataataaattgaaagatcaaagaatcttcttcata 620
Query: 421 ctgaccaggaaacattgggtgttatcaatcagggcttattgtattgcccagaggactcat 480
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 621 ctgaccaggaaacattgggtgttatcaatcagggcttattgtattgctcagaggactcat 680
Query: 481 ggcaatatgtggagacactcatatgatcactactgattggcatcagctaggtcaacccag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggcaatatgtggagacactcatatgatcactactgattggcatcagctaggtcaacccag 740
Query: 541 tgatgttttgacatcagtgtagaaaacaaaaaattatctaatctgaaatattgtagaatt 600
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgatgtttcgacatcagtgtagaaaacaaaaaattatctaatctgaaatattgtagaatt 800
Query: 601 agaatttccaaacttaggcttctatttatatttcttaatttgtttccagg 650
||||||||||||||||||| |||| ||| |||||||||||||||||||||
Sbjct: 801 agaatttccaaacttaggcctctacttacatttcttaatttgtttccagg 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
