Query= MSMg01no519_c19.b1 MSMg01no519_c19.b1 CHROMAT_FILE:
MSMg01no519_c19.b1 PHD_FILE: MSMg01no519_c19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:49 2005
(632 letters)
>mm_chr10_6143162_6144193
Length = 1032
Score = 938 bits (485), Expect = 0.0
Identities = 509/517 (98%)
Strand = Plus / Minus
Query: 1 atgttgccccactctgattcttacagtgaaagctgcctgtggtaacctgagttaaccaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 atgttgccccactctgattcttacagtgaaagctgcctgtggtaacctgagttaaccaat 458
Query: 61 caacattcttgcccattgttgtgttttcctgttctcaccttagaaaccccaattgtcccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 caacattcttgcccattgttgtgttttcctgttctcaccttagaaaccccaattgtcccc 398
Query: 121 ctgtggccactaccccatgggagttttctccctccaatttgtagactagaggctgtcccc 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ctgtggccactaccccgtgggagttttctccctccaatttgtagactagaggctgtcccc 338
Query: 181 attcataaattgggagtaaaacccagttagatctttgacgaaagctgctgtaaatactct 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 337 attcataaattgggagtgaaacccagttagatctttgacgaaagctgctgtaaattctct 278
Query: 241 tttgacagagtttgccctgccgactcctctgtagttcaattccttcttttgagcccttac 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 277 tttgacagagtttgccctgccgactcctctgtaattcaattccttcttttgagcccttac 218
Query: 301 ctctgaagagaggagcatagctcagttggtaaagtacttacttatcatgtgcaaaacccc 360
||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||
Sbjct: 217 ctctgaagagaggagcatagctcagttggtaaactacttacttatcaggtacaaaacccc 158
Query: 361 actgtgagctccagcactgtatgaaccacgttggaggtgcaagcctgtaatcccagcact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 actgtgagctccagcactgtatgaaccacgttggaggtgcaagcctgtaatcccagcact 98
Query: 421 tggaaggtagaagcaggagattcagttaaccctgtctcaagagcaaagcaagatcctaaa 480
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 97 tggaaggtagaagcaggagaatcagttaaccctgtctcaagagcaaagcaagatcctaaa 38
Query: 481 aagacccttcttcttcacgtgtatccatgttgggtct 517
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 aagacccttcttcttcacgtgtatccatgttgggtct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_c19.g1 MSMg01no519_c19.g1 CHROMAT_FILE:
MSMg01no519_c19.g1 PHD_FILE: MSMg01no519_c19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:49 2005
(515 letters)
>mm_chr10_5964524_5965438
Length = 915
Score = 934 bits (483), Expect = 0.0
Identities = 510/525 (97%), Gaps = 10/525 (1%)
Strand = Plus / Plus
Query: 1 atttgggaccagcaagcactccatagagaccctgtctcgaaagaaaggaaggaagaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 atttgggaccagcaagcactccatagagaccctgtctcgaaagaaaggaaggaagaaaag 250
Query: 61 agatgctctttgtcttcagttccttaccagtcactattctcatttaggaaagacacgttc 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 agatgctctttgacttcagttccttaccagtcactattctcatttaggaaagacacgttc 310
Query: 121 cttttttattttactatgttgtgcacctacataagttcagtgcctgcagagtccagaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cttttttattttactatgttgtgcacctacataagttcagtgcctgcagagtccagaaag 370
Query: 181 aggtattggatcccccaggaactgtagttacaaatggctttgagctgccacgagacctgt 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 371 aggtattggatcccccaggaactgtagttacaaatggctttgagctgccatgagacccgt 430
Query: 241 acccagttcctctgcaagtgctgcagtgctcttaagacacctaggcagctcagcagcccc 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 431 acccagttcctctgcaagtgctgcagtgctcttaagacaccgaggcagctcagcagcccc 490
Query: 301 gtgtgacttttcataaacagcttttctttcttcttttttaagttctattttgttgtgtta 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 491 gtgtgacttttcataaacagcttttctttcttcttttttaagttctattttgttgtatta 550
Query: 361 agtgggtggggattttattttttgttgtggagaaagtctccattatcaaa---------- 410
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 agtgggtggggattttattttttgttgtggagaaagtctccattatcaaacggggggggg 610
Query: 411 gggggggggggggcttgacctgggttggagaatgacaaggcctcccttacttccctggtg 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gggggggggggggcttgacctgggttggagaatgacaaggcctcccttacttccctggtg 670
Query: 471 ctggagttacaggcatgtactacccacacaaggtttatattgggg 515
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ctggagttacaggcatgtactacccacacaaggtttatattgggg 715
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
