Query= MSMg01no521_c07.b1 MSMg01no521_c07.b1 CHROMAT_FILE:
MSMg01no521_c07.b1 PHD_FILE: MSMg01no521_c07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:23 2005
(465 letters)
>mm_chr10_20036271_20037135
Length = 865
Score = 864 bits (447), Expect = 0.0
Identities = 459/463 (99%), Gaps = 1/463 (0%)
Strand = Plus / Minus
Query: 2 aggcaggtggatttctgaattcgaggccagcctggtctacagagtgagttccaggacaac 61
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 580 aggcaggtggatttctgaattcgaggccagcctgatctacagagtgagttccaggacaac 521
Query: 62 cacggctacacagagaaaccctgcctcaaaaagccaaatgaatgaatgaatgaatccata 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 cacggctacacagagaaaccctgcctcaaaaagccaaatgaatgaatgaatgaatccata 461
Query: 122 aatatcttagaaccttttttggaataatgtgtaaaagtggctagaaaacaagtgacttca 181
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 460 aatatcttagaaccttttttggaataatgtgtaaaagtggccagaaaacaagtgacttca 401
Query: 182 agcgtggtgacaaatacttccaaagcctgggctacctcaaaaagttaaaaagaaaaaaaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 agcgtggtgacaaatacttccaaagcctgggctacctcaaaaagttaaaaagaaaaaaaa 341
Query: 242 attgttgtaaaggcattgtatgtatcccatctataaatccagtctcttgtcctaggactc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 attgttgtaaaggcattgtatgtatcccatctataaatccagtctcttgtcctaggactc 281
Query: 302 aaaaggcagagacaagagtatcccaacaagttcaagaacagttcagtccatagcgaaggc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 aaaaggcagagacaagagtatcccaacaagttcaagaacagttcagtccatagcgaaggc 221
Query: 362 tctcagttaagttcagtctatagagaaggctctcagttaaggctaatcaagttagagctt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 tctcagttaagttcagtctatagagaaggctctcagttaaggctaatcaagttagagctt 161
Query: 422 cctcaaaaacaaaattttaaaaacaaaaacaaaa-aactaaca 463
|||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 160 cctcaaaaacaaaattttaaaaacaaaaacaaaacaacaaaca 118
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_c07.g1 MSMg01no521_c07.g1 CHROMAT_FILE:
MSMg01no521_c07.g1 PHD_FILE: MSMg01no521_c07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:23 2005
(536 letters)
>mm_chr10_19898808_19899743
Length = 936
Score = 1013 bits (524), Expect = 0.0
Identities = 533/536 (99%)
Strand = Plus / Plus
Query: 1 acaaactacatatcataaacattttgtaattagctctgcttcttaggtatgatgacagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaaactacatatcataaacattttgtaattagctctgcttcttaggtatgatgacagga 260
Query: 61 ggacttgggtgagttccaccagagtctcgaggccatgatgctctcaagttcaagaccaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggacttgggtgagttccaccagagtctcgaggccatgatgctctcaagttcaagaccaca 320
Query: 121 tgaaggctaacgggcaaaggtctttcatacagagccctagttataacaacactcatggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaaggctaacgggcaaaggtctttcatacagagccctagttataacaacactcatggta 380
Query: 181 atgatctatctgaggactctgtcttttgccaggttcagaacaaagtcccagccctaaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgatctatctgaggactctgtcttttgccaggttcagaacaaagtcccagccctaaagg 440
Query: 241 ttcaagcatgtatacctgacttccttggctgcgccccccccatcctttctggcttgcagg 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcaagcatgtagacctgacttccttggctgcgccccccccatcctttctggcttgcagg 500
Query: 301 gctcctgagaagctaatcttgtacggctacacccaaacaccatctacaggccagcaaggc 360
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 gctcctgagaagctaatcttgtaatgctacacccaaacaccatctacaggccagcaaggc 560
Query: 361 aggagaaactggtatctagaaggcgttctcctgaaggccttaatggaaatagaagatgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggagaaactggtatctagaaggcgttctcctgaaggccttaatggaaatagaagatgta 620
Query: 421 ttaactgggaaactgaaaggcacatgctctagagctattttttgataataaatgtaaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttaactgggaaactgaaaggcacatgctctagagctattttttgataataaatgtaaaag 680
Query: 481 tctgctgggtatgatcctgtcagttttacagtcttattttcaatacctgctcacac 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctgctgggtatgatcctgtcagttttacagtcttattttcaatacctgctcacac 736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space: 487076
Effective search space used: 487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
