Query= MSMg01no521_g02.b1 MSMg01no521_g02.b1 CHROMAT_FILE:
MSMg01no521_g02.b1 PHD_FILE: MSMg01no521_g02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:42 2005
(701 letters)
>mm_chr10_63945110_63946210
Length = 1101
Score = 1317 bits (681), Expect = 0.0
Identities = 693/697 (99%)
Strand = Plus / Minus
Query: 5 gaattcacttgcttaaaagcattatgtcggcattcttttcttttatttctttgcctgtga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gaattcacttgcttaaaagcattatgtcggcattcttttcttttatttctttgcctgtga 842
Query: 65 aggaaaagctccttaaattttaaggaaatgcactgtaactttggctataactccggtgag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aggaaaagctccttaaattttaaggaaatgcactgtaactttggctataactccggtgag 782
Query: 125 gtgccccttgacttcagttgtagagttttattaacccattaacttacaatatacctttgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gtgccccttgacttcagttgtagagttttattaacccattaacttacaatatacctttgt 722
Query: 185 gtacaccgcaaaagttcatgtctctggtgtttccttgctgccacaattgtacaactgtgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtacaccgcaaaagttcatgtctctggtgtttccttgctgccacaattgtacaactgtgt 662
Query: 245 gcacacatgtctgtgttaaaatgatggcgtctcagccaggcatgccttgaaaatactgtg 304
|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 661 acacacatgtctgtgttgaaatgatggtgtctcagccaggcatgccttgaaaatactgtg 602
Query: 305 caaaagctgcagtggggatctggagccatgaatctatgacaggtgatattttgtgagaac 364
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 601 caaaagctgcagtggggatctggagccatgaatctatggcaggtgatattttgtgagaac 542
Query: 365 attttcggttcaactgctgatccaatttatctgattcgatgctgtattctgtgagaaagc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 attttcggttcaactgctgatccaatttatctgattcgatgctgtattctgtgagaaagc 482
Query: 425 tttatcctgcttgactctgctgatattcagcttaaatctaaaagcagacacattttggaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttatcctgcttgactctgctgatattcagcttaaatctaaaagcagacacattttggaa 422
Query: 485 gatgtactaaccctcttgaagatggaaaaatatttctcctgagtcatatttctggcattt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gatgtactaaccctcttgaagatggaaaaatatttctcctgagtcatatttctggcattt 362
Query: 545 tagctatacacactggacaaaaaaaaaaagatgaacatacttcagtattcttcacattta 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tagctatacacactggacaaaaaaaaaaagatgaacatacttcagtattcttcacattta 302
Query: 605 gttaaaatttcaaatgaatttccttgctttctaagatgttctcgtttcttttgattatgg 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttaaaatttcaaatgaatttccttgctttctaagatgttctcgtttcttttgattatgg 242
Query: 665 tggagatgtgtatatgttaaaatcaccctggacctgg 701
|||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggagatgtgtatatgttaaaatcaccctggacctgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 701
Length of database: 1101
Length adjustment: 10
Effective length of query: 691
Effective length of database: 1091
Effective search space: 753881
Effective search space used: 753881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_g02.g1 MSMg01no521_g02.g1 CHROMAT_FILE:
MSMg01no521_g02.g1 PHD_FILE: MSMg01no521_g02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:42 2005
(660 letters)
>mm_chr10_63841867_63842926
Length = 1060
Score = 1265 bits (654), Expect = 0.0
Identities = 658/660 (99%), Gaps = 2/660 (0%)
Strand = Plus / Plus
Query: 1 atttgttcattttctcatggagccttttgtttgcttgttttttttttttcttattttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 203 atttgttcattttctcatggagccttttgtttgcttgtttttttttt--cttattttgtt 260
Query: 61 tgttttgttgtttcatgactattttattgtttctatataaggttatcctatctgccagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttttgttgtttcatgactattttattgtttctatataaggttatcctatctgccagca 320
Query: 121 gtgaccagttagcttcttcgggattcttattactctgcctaaattttctactttctgtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgaccagttagcttcttcgggattcttattactctgcctaaattttctactttctgtag 380
Query: 181 tgcccacccatctatggtttcagttttatcaaaatgataaacttgtccaatgaactctta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcccacccatctatggtttcagttttatcaaaatgataaacttgtccaatgaactctta 440
Query: 241 aggtttttacgaagccttttacaggaacgaatgtatgttatttcttatttcagtggttgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggtttttacgaagccttttacaggaacgaatgtatgttatttcttatttcagtggttgc 500
Query: 301 taggagtcattattgatttgttcagattttctcttttttatgattgccatattgcattta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taggagtcattattgatttgttcagattttctcttttttatgattgccatattgcattta 560
Query: 361 gttttagaatttacttgattttcctgtgttgcccagtccatcattactcagtcattcccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttttagaatttacttgattttcctgtgttgcccagtccatcattactcagtcattcccc 620
Query: 421 cttgccctgacatcgctgatagggttctgtcgtatcagttgcaatgtgttctctacaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttgccctgacatcgctgatagggttctgtcgtatcagttgcaatgtgttctctacaaat 680
Query: 481 tcatttgtaattcatgtggacctttcctttttctaatcagctaaaggcttgttgattttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcatttgtaattcatgtggacctttcctttttctaatcagctaaaggcttgttgattttt 740
Query: 541 gtttatattttgtcaacaatattattaattttatgattcatagaatttttaatatacagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtttatattttgtcaacaatattattaattttatgattcatagaatttttaatatacagc 800
Query: 601 atctttctgcatagcccaatctggccttgaacctgtagaactgctcctatctcatcataa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atctttctgcatagcccaatctggccttgaacctgtagaactgctcctatctcatcataa 860
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space: 682500
Effective search space used: 682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
