Query= MSMg01no521_n06.b1 MSMg01no521_n06.b1 CHROMAT_FILE:
MSMg01no521_n06.b1 PHD_FILE: MSMg01no521_n06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:16 2005
(674 letters)
>mm_chr10_106131681_106132754
Length = 1074
Score = 1191 bits (616), Expect = 0.0
Identities = 655/670 (97%), Gaps = 4/670 (0%)
Strand = Plus / Plus
Query: 5 gaattctaataaacttcccaaatatcacctcccgccttatgttagggagtggtgtcccat 64
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaataaacttcccaaatatcacctcccgccttatgttagggagtggtgtcccat 264
Query: 65 ggtataaattgggaaaggggagggcacacaaactttggatctattacaaatattactaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggtataaattgggaaaggggagggcacacaaactttggatctattacaaatattactaat 324
Query: 125 catatagtatgtccattgatcaagtactagaaaaataatgaaacagaatagtaggaacac 184
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catataggatgtccattgatcaagtactagaaaaataatgaaacagaatagtaggaacac 384
Query: 185 aggagagatgtctcaggggagacagcaccattgaaataccaactctaggcaagagggtag 244
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 385 aggagagatgtctcaggggagacagcaccatttaaataccaactctaggcaagagggtag 444
Query: 245 aaatacaaggatatcagttttgggttaattacaggggtggccattgtggaagatgtcaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaatacaaggatatcagttttgggttaattacaggggtggccattgtggaagatgtcaag 504
Query: 305 atgaacttagttgaaatcttaagagacatagaacgtggaagaaaatataaatggtaactt 364
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 505 atgaacttagttgaaatcttaagaaacatagaacgtggaagaaaatataaatggtaactt 564
Query: 365 ttcaaaaaattttattctaaagagaagcaaaaacaggctggaagcaattagaggattata 424
|||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 565 ttcaaagaattttattctaaagagaggcaaaaacaggctggaagcaattagaggattata 624
Query: 425 agataatagaaatatttctttcttcttctcctcctttttcccttcctcctcagcctcagt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 625 agataatagaaatatttctttcttcttctcctcctttttcccttcctcctcagcctcctt 684
Query: 485 gtaccatcccccttcttctttcatttgatttgcaaatcctttattgagttttcatattta 544
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gtaccatccctcttcttctttcatttgatttgcaaatcctttattgagttttcatattta 744
Query: 545 atttttattcacttttcatcctgcttacagcccccatccatcctctcttcccagtctcac 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atttttattcacttttcatcctgcttacagcccccatccatcctctcttcccagtctcac 804
Query: 605 cattacaaact----cctcttcccattgtcccctccccttctcctcagagaaaggtacac 660
||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 805 cattacaaactaactcctcttcccattgtcccctccccttctcctcagagaagggtacac 864
Query: 661 ccctgggttc 670
| ||||||||
Sbjct: 865 cactgggttc 874
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_n06.g1 MSMg01no521_n06.g1 CHROMAT_FILE:
MSMg01no521_n06.g1 PHD_FILE: MSMg01no521_n06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:17 2005
(660 letters)
>mm_chr10_106159882_106160940
Length = 1059
Score = 1166 bits (603), Expect = 0.0
Identities = 645/659 (97%), Gaps = 1/659 (0%)
Strand = Plus / Minus
Query: 1 atacaaagaggaccaagtagtgaattggttaaaccactagctctcatggcaactgcttca 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 858 atacaaagaggaccaagtagtgaattggttaaacctctagctctcatggcaactgcttca 799
Query: 61 tcggagttcaagcatggttcttccttcttagatgtgagcccttgaggaatttgctgtgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 tcggagttcaagcatggttcttccttcttagatgtgagcccttgaggaatttgctgtgct 739
Query: 121 tttatgtctcaatttattcatcagttatggcaaagttacagcaaaaatatacattaattc 180
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 738 tttatgtctcaatttattcatcagttatggcaaagtcacagcaaaaatatacattaatta 679
Query: 181 tgaacccacaagtccttaattatttgtaaaatgtgtttaggaaagtgcaaatacttaata 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 678 tgaacccacaagtccttaattatttgtaaaatgtgtttaggaaagtgtaaatacttaaga 619
Query: 241 aatttaactatttgggctattatcataatgatattgcaatgtaggcacctcgtcacaggt 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aatttaactatttggactattatcataatgatattgcaatgtaggcacctcgtcacaggt 559
Query: 301 gactctgtggaaaacccaaaggccagctttggtactgattctgtcacatgagaattctgc 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 558 gactctgtggaaaacccaaaggtcagctttggtactgattctgtcacatgagaattctgc 499
Query: 361 ttccatggctgatacctcccatgtctgttcccaaggacattctctgaattctagcataat 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ttccatgactgatacctcccatgtctgttcccaaggacattctctgaattctagcataat 439
Query: 421 ggattccaattatttatgttatcgtcttatgtttggctcaatatcatgatgatgatttat 480
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ggtttccaattatttatgttatcgtcttatgtttggctcaatatcatgatgatgatttat 379
Query: 481 gtatcctggccactctgatgttcaaagaacctggtaaacaagataaattaattattgtga 540
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 378 gtatcctggccactctgatgttcaaagaagctggtaaacaagataaattaattattgtga 319
Query: 541 aggttatagatgactaatcaaatatagacagtcaagatcatacacacatttatatgagaa 600
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 318 aggttatagatgactaatcaaatatagacagttaagatcatacacacatttatatgagaa 259
Query: 601 aaagagtactataacttaatttttgggattaacacttccatttatatttgatatctatt 659
||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 258 aaagagtactatatcttgatttt-gggattaacacttccatttatatttgatatctatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1059
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1049
Effective search space: 681850
Effective search space used: 681850
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
