Query= MSMg01no521_o05.b1 MSMg01no521_o05.b1 CHROMAT_FILE:
MSMg01no521_o05.b1 PHD_FILE: MSMg01no521_o05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:21 2005
(282 letters)
>mm_chr10_127135509_127136190
Length = 682
Score = 538 bits (278), Expect = e-157
Identities = 281/282 (99%)
Strand = Plus / Minus
Query: 1 agagcctcctcccctttagcaagctaccatccgtaaggagtgatttggggaaacaggcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 agagcctcctcccctttagcaagctaccatccgtaaggagtgatttggggaaacaggcat 423
Query: 61 gagggtctcccaagacctacaaaagttgtataactgagtttacagtaaaatatactaggt 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 422 gagggtctcccaagacctacaaaaattgtataactgagtttacagtaaaatatactaggt 363
Query: 121 ataaatttctgaaggcttttgttgttagtggtgggctttgtttggggggtggccagcctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ataaatttctgaaggcttttgttgttagtggtgggctttgtttggggggtggccagcctg 303
Query: 181 cacccccaggacaagcacttactgcctctgaggtgcattcccacctcttcaggatcttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cacccccaggacaagcacttactgcctctgaggtgcattcccacctcttcaggatcttca 243
Query: 241 agttctttgaaaagagacaaattttactgtatttataattca 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agttctttgaaaagagacaaattttactgtatttataattca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no521_o05.g1 MSMg01no521_o05.g1 CHROMAT_FILE:
MSMg01no521_o05.g1 PHD_FILE: MSMg01no521_o05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:21 2005
(292 letters)
>mm_chr10_126955973_126956660
Length = 688
Score = 516 bits (267), Expect = e-151
Identities = 284/291 (97%), Gaps = 4/291 (1%)
Strand = Plus / Plus
Query: 1 tgacctggcccctcgcagtgtcttgtgagtggtggtggtaacaacatccgcgtacttgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgacctggcccctcgcagtgtcttgtgagtggtggtggtaacaacatccgcgtacttgaa 260
Query: 61 aggggaggggatcaccttggcagccaccatgccactgatgtgggccatgtctgccagcag 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 aggggaggggatcaccttggcagccaccaggccactgatgtgggccatgtctgccagcag 320
Query: 121 gtgtgccctgacctcatcacagacctgggcaggtagagaaacaggtcacagcctggggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgtgccctgacctcatcacagacctgggcaggtagagaaacaggtcacagcctggggaa 380
Query: 181 gaccgggatgggtatacacaaggcaggtgtccttgccccgtcccgcgcgccccccccccc 240
||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||
Sbjct: 381 gaccgggatgggtatacacaaggcaggtgtccttgcctcg-ccc---cgccccccccccc 436
Query: 241 catagaggaaagcttgattggcagtccctcaccaacctctctcatacgtgc 291
||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 437 catagaggaaagcttgattggcagtccctcaccaacctctctcatgcgtgc 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 688
Length adjustment: 9
Effective length of query: 283
Effective length of database: 679
Effective search space: 192157
Effective search space used: 192157
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
