Query= MSMg01no521_p11.b1 MSMg01no521_p11.b1 CHROMAT_FILE:
MSMg01no521_p11.b1 PHD_FILE: MSMg01no521_p11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:27 2005
(220 letters)
>mm_chr10_53819361_53819980
Length = 620
Score = 395 bits (204), Expect = e-114
Identities = 216/220 (98%)
Strand = Plus / Plus
Query: 1 gaatggctcttggcaaactctgtttctggcttaaaggtggctgctgtcttgctacctggc 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 gaatggctcttggcaaactctgtttctggcttagaggtggctgctgtcttgctacctggc 260
Query: 61 agagataatgagacaatgtgagaattcttatatggacactaatattaaaacagatctcta 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagataatgagacaatgtgaggattcttatatggacactaatattaaaacagatctcta 320
Query: 121 tcctatgacctcttttaaatctagtcttataaattcttccttcaaaatcagtcatactgg 180
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 tcctatgacctcttttaaatttagtcttataaattcttccttcaaaagcagtcatactgg 380
Query: 181 gattaaagcttgaacacatgcattttggacagttcagtgc 220
||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gattaaagcttgaacacatgcattttggacagttcagtgc 420
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 620
Length adjustment: 9
Effective length of query: 211
Effective length of database: 611
Effective search space: 128921
Effective search space used: 128921
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no521_p11.g1 MSMg01no521_p11.g1 CHROMAT_FILE:
MSMg01no521_p11.g1 PHD_FILE: MSMg01no521_p11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:27 2005
(232 letters)
>mm_chr10_54013601_54014230
Length = 630
Score = 379 bits (196), Expect = e-110
Identities = 223/232 (96%), Gaps = 2/232 (0%)
Strand = Plus / Minus
Query: 1 ctgttttaatctgtactccatttttaactgggttgttttcttttttattaattaaaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctgttttaatctgtactccatttttaactgggttgttttcttttttattaattaaaaata 445
Query: 61 agtataaattgctttatttttaaggaaaagcttgaccattgtacaaggaggggttctatt 120
||||||||||||| |||||| ||||| |||||||||||| |||||||||||||||||||
Sbjct: 444 agtataaattgctatattttcaaggacaagcttgaccat-gtacaaggaggggttctatc 386
Query: 121 gtttgtagctagtagcatttatttttcttgtaaagacaagatttgtttgtttccttgata 180
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 385 gtttgtagctagtagcacttatttt-cttgtaaagacaagatttgtttgtttccttgtta 327
Query: 181 tctattttcttgttattgttgttgttttaattctctatatattttaaccatt 232
|||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 326 tctattttcttgttattgttgttgttttaattctttatatattttaaccatt 275
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 630
Length adjustment: 9
Effective length of query: 223
Effective length of database: 621
Effective search space: 138483
Effective search space used: 138483
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
