Query= MSMg01no522_d23.b1 MSMg01no522_d23.b1 CHROMAT_FILE:
MSMg01no522_d23.b1 PHD_FILE: MSMg01no522_d23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:48 2005
(558 letters)
>mm_chr10_73962839_73963797
Length = 959
Score = 1042 bits (539), Expect = 0.0
Identities = 550/555 (99%), Gaps = 5/555 (0%)
Strand = Plus / Plus
Query: 7 gaattccacactaactagattatgatccagatactattttgaaaaataaatttaaggata 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattccacactaactagattatgatccagatactattttgaaaaataaatttaaggata 266
Query: 67 tctaataatgtatattataagaagaatttcaggtgtatgagttaatagtggaagatttgt 126
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 267 tctaataatgtatattataagaagaatttcaggtgtatgagtta-tagtggaagatttgt 325
Query: 127 ttgagctaagttttctaaggagtcttttctttttttttt---cctgtaatcaattgcttc 183
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 326 ttgagctaagttttctaaggagtcttttctttttttttttttcctgtaatcaattgcttc 385
Query: 184 tgaaattaagcagtgcattttaattatatttaatagaaggaaaggaaaaaaggattcacc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tgaaattaagcagtgcattttaattatatttaatagaaggaaaggaaaaaaggattcacc 445
Query: 244 ataaactattagtcacagagtgaaacttgaaaaaaaactttttaaaaaatatgtgttcac 303
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 446 ataaactattagtcacagagtgaaacttgaaaaaaa-ctttttaaaaaatatgtgttcac 504
Query: 304 ccataaatcaaatttactcaccagatgctattaacaaattcccattagttgtcaaaagtt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccataaatcaaatttactcaccagatgctattaacaaattcccattagttgtcaaaagtt 564
Query: 364 aaaaatgcatacaattcacgctttaaatttcacacttcttgcattcatgaagttcgtcaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaaaatgcatacaattcacgctttaaatttcacacttcttgcattcatgaagttcgtcaa 624
Query: 424 tctactacaatatctcagttttgtattgtctacagttttacctccatccatcttcatggt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tctactacaatatctcagttttgtattgtctacagttttacctccatccatcttcatggt 684
Query: 484 ggcttatacccacctcattcaaactgattataaatctatggcaatgcccatgggacttcc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggcttatacccacctcattcaaactgattataaatctatggcaatgcccatgggacttcc 744
Query: 544 ttccgactaatttgt 558
|||||||||||||||
Sbjct: 745 ttccgactaatttgt 759
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 959
Length adjustment: 10
Effective length of query: 548
Effective length of database: 949
Effective search space: 520052
Effective search space used: 520052
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_d23.g1 MSMg01no522_d23.g1 CHROMAT_FILE:
MSMg01no522_d23.g1 PHD_FILE: MSMg01no522_d23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:49 2005
(260 letters)
>mm_chr10_74126342_74126998
Length = 657
Score = 478 bits (247), Expect = e-139
Identities = 256/261 (98%), Gaps = 5/261 (1%)
Strand = Plus / Minus
Query: 1 caaaattagccattgataaatttaaattctgttaagatcacatctgaagtcccatcaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 caaaattagccattgataaatttaaattctgttaagatcacatctgaagtcccatcaccc 398
Query: 61 cctccctgggagatggggaaaggctggaggaatctgttcagaatctttggcctaaccctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cctccctgggagatggggaaaggctggaggaatctgttcagaatctttggcctaaccctg 338
Query: 121 gccaggtgttttcatattcaggtcagagtagagtctacaaacatagaaagttac-ttttt 179
|||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 337 gccaggtgttttcatattcaggtcagagtagagtctacaaacat----agttactttttt 282
Query: 180 tgagaataatcgtgaaggcaggaaaggttcttggtataggaagggaggaggagtatagag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tgagaataatcgtgaaggcaggaaaggttcttggtataggaagggaggaggagtatagag 222
Query: 240 ggtagaggagagagtgggaaa 260
|||||||||||||||||||||
Sbjct: 221 ggtagaggagagagtgggaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 260
Length of database: 657
Length adjustment: 9
Effective length of query: 251
Effective length of database: 648
Effective search space: 162648
Effective search space used: 162648
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
