Query= MSMg01no522_m11.b1 MSMg01no522_m11.b1 CHROMAT_FILE:
MSMg01no522_m11.b1 PHD_FILE: MSMg01no522_m11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:28 2005
(385 letters)
>mm_chr10_84806804_84807588
Length = 785
Score = 644 bits (333), Expect = 0.0
Identities = 370/385 (96%), Gaps = 7/385 (1%)
Strand = Plus / Minus
Query: 5 gaattctaaatttaaaactggctttccagggcattacacttttataatcgtagaatcgtg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gaattctaaatttaaaactggctttccagggcattacacttttataatcgtagaatcgtg 557
Query: 65 gttgtcagagtaggtgcatacaacatatttttcagtttagagttcctgggcctgatttat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gttgtcagagtaggtgcatacaacatatttttcagtttagagttcctgggcctgatttat 497
Query: 125 cacatttaagagtttgcataagtggtacttgggtctctgtgtccttgtcccaggtcccac 184
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 496 cacatttaagagtttgcataagtggtacttgggtctctgtgtccttgttccaggtcccac 437
Query: 185 agctgctaaggctgtttaaggaagtgagtgtactgtctgagtctacctaggctgcctggg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 agctgctaaggctgtttaaggaagtgagtgtactgtctgagtctacctaggctgcctggg 377
Query: 245 cttctgactctttccttcaccattgccttgtgtgagaaggacattaggtttaaaaataaa 304
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 376 cttctgactctttccttcaccattgccttgtgcgagaaggacattaggtttaaaaataaa 317
Query: 305 aacgtatgtgtctgtctgtctatct----tgtatatgtatatgtatgtgtatgtgtat-- 358
||||||||||||||||||||| ||| ||||||||||||||||| ||||| |||||
Sbjct: 316 aacgtatgtgtctgtctgtctgtctgtcttgtatatgtatatgtatatgtatatgtatat 257
Query: 359 gt-tatgtgtatgtgtatgtgtatg 382
|| ||||| ||||| ||||| ||||
Sbjct: 256 gtatatgtatatgtatatgtatatg 232
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_m11.g1 MSMg01no522_m11.g1 CHROMAT_FILE:
MSMg01no522_m11.g1 PHD_FILE: MSMg01no522_m11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:28 2005
(570 letters)
>mm_chr10_84761171_84762140
Length = 970
Score = 1017 bits (526), Expect = 0.0
Identities = 559/570 (98%)
Strand = Plus / Plus
Query: 1 tccttggaaaattgtcttccccacacctaaagagtccagctggactttgtcctcgttccc 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 201 tccttggaaaattgtcttccccacacctaaagagtccagctggattttgtccttgttccc 260
Query: 61 caaagggcagggaacagaagagaaagagggaacaggaaggaaaagcagagcatgatgggg 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 caaagggcagggaacagaagagaaagagggaacaggaagggaaagcagagcatgatgggg 320
Query: 121 gatggagtctctacctgtgtttttcccttttatcttcttgggaaatgacccaagagcttg 180
|||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 321 gatggagtctctacctgtgtttttccctcttatcttcttgggaaatgatccaagagcttg 380
Query: 181 gaaaaagcatgaatgtacatattccagcccagaaggacttgagtagaatttgggaggctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaaaagcatgaatgtacatattccagcccagaaggacttgagtagaatttgggaggctg 440
Query: 241 gtaaaatggtccagtggtttagagctcatgttgctcctacagcggatcagattctgattc 300
||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||
Sbjct: 441 gtaaaatggtccagtggtttagagctcatgttgctactacggcggatcagagtctgattc 500
Query: 301 ccactgtccacatctgatggtcacagatgcctgaactccagcctcagggagctctgatac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccactgtccacatctgatggtcacagatgcctgaactccagcctcagggagctctgatac 560
Query: 361 cttttgcttttggaagtacctaaactcatgcttgtgcacacaaacatgcgcacagaagca 420
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 cttttgcttttggaagtacctaaaatcatgcttgtgcacacaaacatgcgcacagaagca 620
Query: 421 tgtgccctccacacacacttaaaaatacgtgtgaaagataaatctggccgggcggtggtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtgccctccacacacacttaaaaatacgtgtgaaagataaatctggccgggcggtggtg 680
Query: 481 gtgcacacctttaatcccagcacttgggaggcagaggcaggtagatttctgagttcgagg 540
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 681 gtgcacacctttaatcccagcacttgggaggcagaggcaggtggatttctgagttcgagg 740
Query: 541 ccagcctggtctacaaagtgagctccagga 570
|||||||||| |||||||||||||||||||
Sbjct: 741 ccagcctggtttacaaagtgagctccagga 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
