Query= MSMg01no526_h14.b1 MSMg01no526_h14.b1 CHROMAT_FILE:
MSMg01no526_h14.b1 PHD_FILE: MSMg01no526_h14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:24 2005
(656 letters)
>mm_chr10_59771361_59772415
Length = 1055
Score = 1156 bits (598), Expect = 0.0
Identities = 639/656 (97%), Gaps = 8/656 (1%)
Strand = Plus / Plus
Query: 4 ggaattctacaaatataacagagagatgactagagatggcacaggctagaccagtggttc 63
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattccacaaatataacagagagatgactagagatggcacaggctagaccagtggttc 264
Query: 64 ttagcctgtgggtcttgacccctttgggggtcacctaagcactggaaaacacagatagta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttagcctgtgggtcttgacccctttgggggtcacctaagcactggaaaacacagatagta 324
Query: 124 aattatggttcacaacagtagcaagattacagttatgaagtagcaatgactgttttacag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aattatggttcacaacagtagcaagattacagttatgaagtagcaatgactgttttacag 384
Query: 184 ttggtggctaccacatcatgaggaactgtattaaaagggtctcagcattaggacggttga 243
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttggtggctaccacatcacgaggaactgtattaaaagggtctcagcattaggacggttga 444
Query: 244 gaaccactggcctagatgactctaaaaaagacaaaagacctgggttcaaaacccaccact 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaaccactggcctagatgactctaaaaaagacaaaagacctgggttcaaaacccaccact 504
Query: 304 ttctaggcatgtggcaagttccatagcttctctgcaagttggtttgttaaagtaag---a 360
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 505 ttctaggtatgtggcaagttccatagcttctctgtaagttggtttgttaaagtaagggca 564
Query: 361 gcagtgggggctgggatcgtagctcagtggcagggtttgctcatcatgcccaaggccctg 420
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcag----ggctgggatcgtagctcagtggcagggtttgctcatcatgcccaaggccctg 620
Query: 421 ggtttggttcctagcatcacattttaaaaagcacagtatgcgctcaggagatccagctat 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 621 ggtttggttcctagcatcacattttaaaaagcacagtatgtgctcaggagatccagctat 680
Query: 481 ccaactcaagcaggtgggatctgcactaaaccttgaaggtgggcatctcaggaaaggtga 540
||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccaactcaagcaggtag-atcttcactaaaccttgaaggtgggcatctcaggaaaggtga 739
Query: 541 aggttgggcgttgaggaaatgaaggcaaacgggtcagtgacctagggatgtggcgtgtct 600
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 740 aggttgggcgttgaggaaatgaaggcaaacgggtcagtgacccagggatgtggtgtgtct 799
Query: 601 gaatacagagcccagtatagagggtagaggctatgaggtaagaagtggggaccaga 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gaatacagagcccagtatagagggtagaggctatgaggtaagaagtggggaccaga 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1055
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1045
Effective search space: 675070
Effective search space used: 675070
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_h14.g1 MSMg01no526_h14.g1 CHROMAT_FILE:
MSMg01no526_h14.g1 PHD_FILE: MSMg01no526_h14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:25 2005
(636 letters)
>mm_chr10_59816377_59817412
Length = 1036
Score = 1168 bits (604), Expect = 0.0
Identities = 628/636 (98%)
Strand = Plus / Minus
Query: 1 ccagcacccacgtgtggctcacagctagctgtctctaactccagttccaagggatccccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970 ccagcacccacgtgtggctcacagctagctgtctctaactccagttccaagggatccccg 911
Query: 61 atgccctcttctggcctcctcagacatggtgcacagacatgtactctggcaaaacttctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 atgccctcttctggcctcctcagacatggtgcacagacatgtactctggcaaaacttctg 851
Query: 121 gacacatcaaataatttttaagtggggatttgatgtgaacaacttggctcccagcttctc 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 850 gacacatcaaataatttttaagtggggatttgatgtgaacaacttgactcccagcttctc 791
Query: 181 tttacagcaagtagctggttttgtccacggcagcctagaggttcccttacgggcctgtat 240
||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 790 tttacagcaagtagctggttttgtccatggcagcctagaggttcccttacaggcctgtat 731
Query: 241 gaactaggtatggtcactaacccatggctctaacagagactacctacggctacctaggga 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ggactaggtatggtcactaacccatggctctaacagagactacctacggctacctaggga 671
Query: 301 aaggggcttcccagacatccacagaaggaaccaacccacaaagagtggcaatatctctgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 aaggggcttcccagacatccacagaaggaaccaacccacaaagagtggcaatatctctgc 611
Query: 361 cctatccccgtggccattggacaactatcccagtcccctctctcctctgttcaacggctc 420
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 610 cctaaccccgtggccattggacaactatcccagtcccctctctcctctgttcaatggctc 551
Query: 421 ctgcctgagagacattactgttcttgcagccaaatttagttccatcagcctttgctcagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 550 ctgcctgagagacattactgttcttgcagccaaatttagttccatcagcctttgcccagc 491
Query: 481 ccacagaccctgggggctgtcaggagggcaggtaaagcagcggccaggcctgcagcgggt 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 490 ccacagaccctgggggctgtcaggagggcaggtaaagcagtggccaggcctgcagcgggt 431
Query: 541 taaaggcggcaggacaaggggcaagatgcttagaaacaaaggcaggaatgaggtgggact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 taaaggcggcaggacaaggggcaagatgcttagaaacaaaggcaggaatgaggtgggact 371
Query: 601 cacatgtagcatgagtgtttctgaaactgggggttg 636
||||||||||||||||||||||||||||||||||||
Sbjct: 370 cacatgtagcatgagtgtttctgaaactgggggttg 335
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
