Query= MSMg01no528_b23.b1 MSMg01no528_b23.b1 CHROMAT_FILE:
MSMg01no528_b23.b1 PHD_FILE: MSMg01no528_b23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:38 2005
(299 letters)
>mm_chr10_98386917_98387615
Length = 699
Score = 547 bits (283), Expect = e-160
Identities = 292/295 (98%)
Strand = Plus / Minus
Query: 5 gaattctatagatctatattttctatctataggcattggcaggctgtatcatgtatgtgt 64
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 499 gaattctatagatctatattttctatctataggcattggcaggctgcatcatgtatgtgt 440
Query: 65 gcacctactacctgtgtgcattctggtacaggaagatcaagacttactgctttaatccgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gcacctactacctgtgtgcattctggtacaggaagatcaagacttactgctttaatccgt 380
Query: 125 tttacttttgctaatcctcctcttcaaattccttttattttccactagcaaaaccacgcc 184
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 379 tttacttttgctaatcctcctcttcaaattccttttattttccactggcaaaaccacgcc 320
Query: 185 tgtgcatctctctgaccaacagttgcactataattacaatgatataaagttaaagcagga 244
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 319 tgtgcatctctctgaccaacagttgcactataattacaatgatacaaagttaaagcagga 260
Query: 245 ccaagtcccagtattttctataggactttatgaaattctatttatataccctggt 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ccaagtcccagtattttctataggactttatgaaattctatttatataccctggt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space: 200100
Effective search space used: 200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_b23.g1 MSMg01no528_b23.g1 CHROMAT_FILE:
MSMg01no528_b23.g1 PHD_FILE: MSMg01no528_b23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:38 2005
(135 letters)
>mm_chr10_98238882_98239415
Length = 534
Score = 253 bits (131), Expect = 2e-72
Identities = 134/135 (99%), Gaps = 1/135 (0%)
Strand = Plus / Plus
Query: 1 cttgctcagcatctctgtgtncactttctcttcctgctttctgtctcaacagaaacagga 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttgctcagcatctctgtgt-cactttctcttcctgctttctgtctcaacagaaacagga 259
Query: 61 actatttgagggtggagcctgagtgggggtgggcaaccacaaaaagtgaccaagatcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 actatttgagggtggagcctgagtgggggtgggcaaccacaaaaagtgaccaagatcttc 319
Query: 121 aatcttcatagtggg 135
|||||||||||||||
Sbjct: 320 aatcttcatagtggg 334
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 135
Length of database: 534
Length adjustment: 8
Effective length of query: 127
Effective length of database: 526
Effective search space: 66802
Effective search space used: 66802
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
