Query= MSMg01no528_j20.b1 MSMg01no528_j20.b1 CHROMAT_FILE:
MSMg01no528_j20.b1 PHD_FILE: MSMg01no528_j20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:16 2005
(544 letters)
>mm_chr10_122105213_122106158
Length = 946
Score = 930 bits (481), Expect = 0.0
Identities = 528/547 (96%), Gaps = 8/547 (1%)
Strand = Plus / Minus
Query: 1 ggtaactgtctgctgcctcttgaccaccctcctagactgagttgcacagtaggccatttg 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 ggtaactgtctgcttcctcttgaccaccctcctagactgagttgcacagtaggccatttg 845
Query: 61 tctagacatatctttctgtcacttacttatcaggaaagagcaggacaatattttaagtaa 120
|||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 844 tctagacatatcttcctgtc----acttatcaggaaagagcaggacaatattttaagtaa 789
Query: 121 gtttatatagatttaaatgtataatttaaatatagaattataggaacatatgtgaagaac 180
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 788 gtttatatagatttaaatatataatttaaatatagaatcataggaacatatgtgaagaac 729
Query: 181 tgaattgttgttaatgtagccactaatctttttaaaagtcttgttatcttgtgttcaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 tgaattgttgttaatgtagccactaatctttttaaaagtcttgttatcttgtgttcaaaa 669
Query: 241 ttgaagggaaattaaattg---aaaaaaaagggcggattaacaagaggaaatagttcttt 297
|||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 668 ttgaggggaaattaaattggaaaaaaaaaagggcagattaacaagaggaaatagttcttt 609
Query: 298 atacgtgaaataagatatgtttagatgttcatgagaagctttgaaaggcaggttaagtac 357
||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||
Sbjct: 608 atacgtgaaataagatatgttcagatgttcacgagaagctttgaaaggcagattaagtat 549
Query: 358 agagtttttatcttaattgaatagtggagggggggatctaatactcttagaaggggtgag 417
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 548 agagtttttatcttaattgaatagtggagggggg-atctaatactcttagaaggggtgag 490
Query: 418 taagtgggtttccttatgaatgaaagatggattttttttaggacaaacatgaggtaagaa 477
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 489 taagtgggtttccttatgaatgaaagatggattttttttagaacaaacatgaggtaagaa 430
Query: 478 aaattctcagattttcctgcttccgcaagcttgagtggtcttcacagctggcactgccca 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aaattctcagattttcctgcttccgcaagcttgagtggtcttcacagctggcactgccca 370
Query: 538 ctgagag 544
|||||||
Sbjct: 369 ctgagag 363
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 946
Length adjustment: 10
Effective length of query: 534
Effective length of database: 936
Effective search space: 499824
Effective search space used: 499824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_j20.g1 MSMg01no528_j20.g1 CHROMAT_FILE:
MSMg01no528_j20.g1 PHD_FILE: MSMg01no528_j20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:16 2005
(173 letters)
>mm_chr10_121935338_121935910
Length = 573
Score = 242 bits (125), Expect = 1e-68
Identities = 141/147 (95%), Gaps = 2/147 (1%)
Strand = Plus / Plus
Query: 1 ctgaatgtaggattagtcctctcggattcccatgccttgtcctgaggctcttttgtttgt 60
||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 201 ctgaatgtaggattagtagtctcggattcccgtgccttgtccttaggctcttttgtttgt 260
Query: 61 tggcttctcttgtcaacttcaaatggtgggtgtttttatttatcttattattttattctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggcttctcttgtcaacttcaaatggtgggtgtttttatttatcttattattttattctg 320
Query: 121 tttgt--tttattctgtttttattctg 145
||||| ||||||||||||||||||||
Sbjct: 321 tttgtgttttattctgtttttattctg 347
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 173
Length of database: 573
Length adjustment: 8
Effective length of query: 165
Effective length of database: 565
Effective search space: 93225
Effective search space used: 93225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
