Query= MSMg01no532_b05.b1 MSMg01no532_b05.b1 CHROMAT_FILE:
MSMg01no532_b05.b1 PHD_FILE: MSMg01no532_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:54 2005
(598 letters)
>mm_chr10_6139500_6140497
Length = 998
Score = 1048 bits (542), Expect = 0.0
Identities = 583/598 (97%), Gaps = 6/598 (1%)
Strand = Plus / Plus
Query: 4 ggaattctttgagaatttgttttgaggcttaattaactggaatggcaaagagtgcttatg 63
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 202 ggaattcttcgagaatttgttttgaggcttaattgactggaatggcaaagagtgcttatg 261
Query: 64 cctgtaattctctagtttgtttgtttgtttgtttgtttgttttgt---tttgttttgttt 120
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 262 cctgtaattctctagtttgtttgtttgtttgtttgtttg-tttgtttgtttgttttgttt 320
Query: 121 tcaaaacaatgtttttctgtgtcctgggtgtcctggaactggcccagtagaccggactgg 180
|||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 321 tcaaaacaatgtttctctgtgtcccgggtgtcctggaactggccctgtagaccggactgg 380
Query: 181 cttcaaactcagagagctacctgagagctgttca-ttgcctacagagtgctgggattaat 239
||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 381 cttcaaactcagagagctacctgagagct-ttccgttgcctacagagtgctgggattaat 439
Query: 240 ggcttgtgccaccactgcctggcgttgtctgtaactcttaccctgattttgtttagtcat 299
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 440 ggcttgtgccaccactgcctggcgttgtctgtaactcttagcctgattttgtttagtcat 499
Query: 300 ttttccatggctgtgttcattaactttatttgctaaattcacctatttatttttagggag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttttccatggctgtgttcattaactttatttgctaaattcacctatttatttttagggag 559
Query: 360 gtgatcttgaaattattctaatcttcttaatgaattaaacattaattgattaaaggcaca 419
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 560 gtgatcttgaaattattctaatcttcttaatgaattaaactttaattgattaaaggcaca 619
Query: 420 tatctttaatcttggaatttgtgaagcagaggcaggaggatcaggacttcaaaattttcc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tatctttaatcttggaatttgtgaagcagaggcaggaggatcaggacttcaaaattttcc 679
Query: 480 tcaactatatagtatgcttgaggcaagcctcggctacatgagctttatcggcaaagaata 539
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 680 tcaactatatagtatgcttgaggcaagcctcggctacatgagctttatcgtcaaagaata 739
Query: 540 aaaacaagggattttagagagatggctcagtgcttaagagcacttcctgttcttccaa 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aaaacaagggattttagagagatggctcagtgcttaagagcacttcctgttcttccaa 797
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_b05.g1 MSMg01no532_b05.g1 CHROMAT_FILE:
MSMg01no532_b05.g1 PHD_FILE: MSMg01no532_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:54 2005
(271 letters)
>mm_chr10_6295344_6296014
Length = 671
Score = 470 bits (243), Expect = e-137
Identities = 264/271 (97%)
Strand = Plus / Minus
Query: 1 tatagtgagagcctgtctcaaaagaatcacagttgggaggtagctcagtgctacagtgct 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 471 tatagtgagagcctgtctcaaaagaatcacagttgggaggtagctcagtactacagtgct 412
Query: 61 tgccttggtctagcaaaacaagtagtaaggaagcaaatagacattactgaacctttaagc 120
||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 411 tgccttggtctagcaaaacaactagtaaggaagcaaatagacactactgaacctttaagc 352
Query: 121 catcttcctctctgtgagtctaatttcatttgtcctaagcaatgcttactacattcacat 180
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 351 catcctcctctctgtgagtctaatttcatttgtcctaagcaatgcttagtacatttacat 292
Query: 181 cgtgtctaattttcatttatggtattgaccgttttaagattatttggacagaaaatgtat 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 291 cgtgtctaattttcatttatggtattgaccgttttaagattatttagacagaaaatgtat 232
Query: 241 ttttaagaacaaagcatagaatttggttaag 271
|||||||||||||||||||||||||||||||
Sbjct: 231 ttttaagaacaaagcatagaatttggttaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 671
Length adjustment: 9
Effective length of query: 262
Effective length of database: 662
Effective search space: 173444
Effective search space used: 173444
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
