TTTTTTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCGAGGA
TCCGCGGAATTCAAACTCAGGATCTCATGCTTGGCTGGCAAGAACTGTAT
TGACTTAGCCATCTCTTCAGGCTCTTATATATATATGTTTTCAACATTTT
TGTAGCACCATTGAAAATAAGTTAATTCAATTATATAGTTTAATAACTTA
AAACAATATTATTTTACCCATTAGCTAACATAATTATTACTAATGATATT
CTGTCCATTACTTTGTTGTACTAAGTATTTAAAATTAATCATTGATTTCA
CACTGTGAACATCTGAAACCAGAGTGAACCACTTTCTAACTGCTGAGTGT
CTATACAGTGCAGTAGTTAATATATCAGACAGGAAAGACTAGAACAATTG
AAAGATTCCAGAACTGTTCACGAAGCCTGAAATCTGTTTCTTTCAAAGAG
CCCAGGCCATTGTGAATTANGAAATCANGTGAGGGATAGTANGAATTGCN
NAACAACAAACAAACAACCAAACAATAAATTAATAAATAAATAATTAATT
TAACCAACCAACCAACCTGAAAAGAACCTGGAAGGAAGGTTTCCGCCCCC
CGGGAAAATTCCCCCAAGGGAAAACTTCCCCTTTTCCCAAAAGGGTTAAA
ATTTTCTTTGGGGGTCCTCCACAAAAATTTTTTCTTACAAGGGACCCTGG
AGAAAGGGGTTTTTTCTCCCCCGGG

CCCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAGACTTTTACCAAG
AATGGGTGTTGGATTTTGTCAAATGCTTTCTCCACATCTAAGGAGATGAT
CATGTGGTTTTTGTCTTTGAATTTGTTTATATACTGGATTATGTTGATGG
ATTTTCATATATTAAACCATCCCTGCATCCCTGGAATGAAACCTACTTGG
TCAGGATGGATGTTTATTTTTATGTGTTCTTGGAATTGGTTAGCGAGAAT
TTTATTGAGTATTTTTGCATCGATATTCATAAGGGAAAATGGTCTTAAGT
TCTCTATCTTTGTTATGTCTTTCTGTGGTTTACGAATCAGAGTAATTGAG
GCTTCATAGAATGAATTGGTAGAGTACCTTCTGCTTCTATTTTCTGGAAT
AGATTGTGAAGAACTGGAATTAGATCTTCTTTGAAGGTCTGATAGAACTC
TGCACTAAACCCATCTGGTCCTGGGCTTTCTTTGGTTGGGAGACTATTAA
TGATTGCTTCTATTTCTTTAGGGGATATAGGAGTGTTTAGATCATTAACC
TGATCCTGATATAACTTTGGTACCTGGTATCTGTCTAGAAATTTGTCCAT
TTCATCCAGGTATTCCAGTTGTGTTGAGTATAGCTTTTTGTAGAAGGATC
TGATGGTGTTTTCGATTTCTTCANGATCTGTTGTTATGTCTCCC

Query= MSMg01no533_j18.b1 MSMg01no533_j18.b1 CHROMAT_FILE:
MSMg01no533_j18.b1 PHD_FILE: MSMg01no533_j18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:51 2005
         (416 letters)



>mm_chr10_64817245_64818060
          Length = 816

 Score =  766 bits (396), Expect = 0.0
 Identities = 406/410 (99%), Gaps = 2/410 (0%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattcaaactcaggatctcatgcttggctggcaagaactgtattgacttagccatctct 66
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gaattcaaactcaggatctcatgcttggctggcaagaactgtattgacttagccatctct 268

                                                                       
Query: 67  tcaggctcttatatatatatgttttcaacatttttgtagcaccattgaaaataagttaat 126
           ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tcaggctcttatatatat--gttttcaacatttttgtagcaccattgaaaataagttaat 326

                                                                       
Query: 127 tcaattatatagtttaataacttaaaacaatattattttacccattagctaacataatta 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tcaattatatagtttaataacttaaaacaatattattttacccattagctaacataatta 386

                                                                       
Query: 187 ttactaatgatattctgtccattactttgttgtactaagtatttaaaattaatcattgat 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ttactaatgatattctgtccattactttgttgtactaagtatttaaaattaatcattgat 446

                                                                       
Query: 247 ttcacactgtgaacatctgaaaccagagtgaaccactttctaactgctgagtgtctatac 306
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttcacactgtgaacatctgaacccagagtgaaccactttctaactgctgagtgtctatac 506

                                                                       
Query: 307 agtgcagtagttaatatatcagacaggaaagactagaacaattgaaagattccagaactg 366
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 507 agtgcagtagttaatatatcagacaggaaagactagagcaattgaaagattccagaactg 566

                                                             
Query: 367 ttcacgaagcctgaaatctgtttctttcaaagagcccaggccattgtgaa 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ttcacgaagcctgaaatctgtttctttcaaagagcccaggccattgtgaa 616


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space:   328449
Effective search space used:   328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)