Query= MSMg01no535_f12.b1 MSMg01no535_f12.b1 CHROMAT_FILE:
MSMg01no535_f12.b1 PHD_FILE: MSMg01no535_f12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:08 2005
(599 letters)
>mm_chr10_92036858_92037858
Length = 1001
Score = 1137 bits (588), Expect = 0.0
Identities = 594/596 (99%), Gaps = 2/596 (0%)
Strand = Plus / Minus
Query: 6 ggaatt-aataaatatttgttgagtgaat-aacacatgcaagttttccttgctatttggt 63
|||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 801 ggaattcaataaatatttgttgagtgaataaacacatgcaagttttccttgctatttggt 742
Query: 64 aagatccttgatgcatagactgacgttctaaagacactctatttggatcaatatggaact 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aagatccttgatgcatagactgacgttctaaagacactctatttggatcaatatggaact 682
Query: 124 gattcttatatccactgtttagtctcctgcaagacagcccacctcagccctaccctatgc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gattcttatatccactgtttagtctcctgcaagacagcccacctcagccctaccctatgc 622
Query: 184 cagggttctcctctcaatggatggcaagtaggttctggaaccagatatttttcatgttaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagggttctcctctcaatggatggcaagtaggttctggaaccagatatttttcatgttaa 562
Query: 244 tgatcattttggcttcaatagagtatgtccattagatggtaggtagtccccatttgttct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgatcattttggcttcaatagagtatgtccattagatggtaggtagtccccatttgttct 502
Query: 304 aagtccaacccagttcaagaaaaaacagctgtggcttccttcaggttcagctttgttctg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagtccaacccagttcaagaaaaaacagctgtggcttccttcaggttcagctttgttctg 442
Query: 364 ctgctctttcttagggaaagtgtctgagtagaacacatactattccctttctcctttgtt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgctctttcttagggaaagtgtctgagtagaacacatactattccctttctcctttgtt 382
Query: 424 cctctttggcaaaaagaaagctgcttatgaatttgcctatgtggatactattcttctttt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctctttggcaaaaagaaagctgcttatgaatttgcctatgtggatactattcttctttt 322
Query: 484 cctaggctgcctgacccaagaccccctacattgatgggaaaggtggaaaggaagagatga 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctaggctgcctgacccaagaccccctacattgatgggaaaggtggaaaggaagagatga 262
Query: 544 aacttacttatttcacttggataacgcttttagatgtgactgtttgtttgtttgtt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacttacttatttcacttggataacgcttttagatgtgactgtttgtttgtttgtt 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 1001
Length adjustment: 10
Effective length of query: 589
Effective length of database: 991
Effective search space: 583699
Effective search space used: 583699
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no535_f12.g1 MSMg01no535_f12.g1 CHROMAT_FILE:
MSMg01no535_f12.g1 PHD_FILE: MSMg01no535_f12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:08 2005
(604 letters)
>mm_chr10_91893789_91894792
Length = 1004
Score = 1160 bits (600), Expect = 0.0
Identities = 603/604 (99%)
Strand = Plus / Plus
Query: 1 gccttccacaggaaacactgacataggccaagcatttctgatctctcctgcccatctatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gccttccacaggaaacactgacataggccaagcatttctgatctctcctgcccatctatc 260
Query: 61 caaatgaataggatgcttaccttgcaatttctgcaaagatacaacactttctctgcatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaatgaataggatgcttaccttgcaatttctgcaaagatacaacactttctctgcatcc 320
Query: 121 acgtcctggacaatgctgtgccagatgcaacgctttgttattttcctatagtgccacctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acgtcctggacaatgctgtgccagatgcaacgctttgttattttcctatagtgccacctc 380
Query: 181 tgcaattttctcacgaaggacaaatctctgtcgattgattgctattgaacgaatatccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcaattttctcacgaaggacaaatctctgtcgattgattgctattgaacgaatatccaa 440
Query: 241 tgtggtcacatgcttcttaggtgctcagaagcatcgctatggaagaacggcaccagacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtggtcacatgcttcttaggtgctcagaagcatcgctatggaagaacggcaccagacct 500
Query: 301 caaggatttctctggtgatggcagatgaggctcatacagggtgctttagaaatagagagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaggatttctctggtgatggcagatgaggctcatacagggtgctttagaaatagagagc 560
Query: 361 atcctagatccttcattgtatgttgaaaacaaaccaagcaaggggctaaagagctggcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atcctagatccttcattgtatgttgaaaacaaaccaagcaaggggctaaagagctggcta 620
Query: 421 agttggtggtgaagtgcttgctatcaatgcaggaagacctgagttctattcccggctcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agttggtggtgaagtgcttgctatcaatgcaggaagacctgagttctattcccggctcac 680
Query: 481 ccttgaaaggtgggtgtgacctcacacatatttaataccagcactggattaggcaatagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 681 ccttgaaaggtgggtgtgacctcacacatatttaataccagcactggattaggcagtagg 740
Query: 541 atcccttggatttgctcgccaggcagtctagccttagcaaatcctaggttcagtaacaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atcccttggatttgctcgccaggcagtctagccttagcaaatcctaggttcagtaacaga 800
Query: 601 ctca 604
||||
Sbjct: 801 ctca 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space: 590436
Effective search space used: 590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
