TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTGTTAGCTGTTGTCATATTATAAAAATTTGAGAAAAATCTTAAC
CATTTTTTAAAAAATGACAGTGCATATATACTTAGTCATCAAAATAATGG
TTTTAAATAATATTTGACCCTGTGGAGATCATCATAATAATTGAATTAAG
TATCAGATTGTGTGTTCAGTGGTGAGCCCAGTTTCTTTGGGAGGAATGGG
TAGGGATAGTAGATGTCAAGAGAAGAGACCCTAATTTGATTTTATGTTAT
AGCAGCATAGAAAAAGAGGCCCAAAACAGGACAAAATATTAAATTGTTTT
TTTTCAATTTGATGAGAGCATGAGTGATTTATATTTTTCCCACATTTCAC
TTGTTCATGTTTTGCAATGATATTTTATTAAATACCATATATCATAGAAT
TTCTATATTCTTGCCTCTCATCTTTACAGATTTTGTTGGACATGTTTTAG
TTTCCTCTTCTTTTCAAAGCTACTGTAATTTCACTTCCTCAGGATCTTCA
CCCACACACAATCTGCTGGGATTTTCTTGTACCTAACTTGCTTTTTTGTG
TATAGACCGGTCCCAAGGTTGTGCTTTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTTNNNNNNNNNNNNNNNNNTTTTTTNNTTTTTTN
NTTTTNNTTTTTTNTNNNTTTTTTTTTNNTTTTTNTTTTTTTTTTTTCTT
NTTTTTTNTTTTNTTTTTTCCTTTNTTNTTTTTTTTTTT

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAAGGTGTAGTCCAGGCTGGTGTCAA
ATTTGTAGAGATCAGCCTGCCTCAAAGTTCTGGGATTAAAGGCATGCCCC
ACTACCACCCACCCAGCTTAAATTTAAGAACTTCCAGGTCTGGACTAACT
CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTANAAAAAAAATAATATAAAATTTAAATTAATTTATTTT
TAATTATTTTTTTNTTTTTTATTTTTTTTTTTAATATTATAATTTAATTT
TTATTTTATAAATTTATTTTATTTTATATTATTTATAATATAATTTAAAA
TATTATTTTATTTTATTTTATTACTTATATTTTTTTATTTANAAATAAAA
TAAAATTAAAATTATAATTTTATTTTTTTTATATTAAATTATTATATTTT
TTTTTACTCTCTTACTAATATCTACATCTTTCCTATTCATCAACTCACTT
TTTTTATTCTTATATACCTTTCCCTTTTTTTTTCTACTTTTATTACTTAT
TTCTTTTTCTTCTACCCTCTTTTCTCTTAATCTATTATTACTCCATTTCT
TCTCCTTTTCTTTTATACTCTCCTCACCATCAATAACCACATATACTTAT
TCTTATTCCCCTTCCCCTACAATCTTTTCTTCNCACACTTTATTTCTTCT
ATTCTCTACCTTCCCATTCCTTTTACTCCTCTTCCCTCCTCATTACTATA
TAATTTTTCCTACCATACTACTCCATACTACATTTTATCTCATCCTCCCT
TCTTTTTCTGATATTTCTTTACACN

Query= MSMg01no535_n08.b1 MSMg01no535_n08.b1 CHROMAT_FILE:
MSMg01no535_n08.b1 PHD_FILE: MSMg01no535_n08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:45 2005
         (619 letters)



>mm_chr10_30509294_30510311
          Length = 1018

 Score = 1102 bits (570), Expect = 0.0
 Identities = 605/618 (97%), Gaps = 6/618 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctgttagctgttgtcatattataaaaatttgagaaaaatcttaaccatttttta 63
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 ggaattatgttagctgttgtcatattataaaaatttgagaaaaatcttaaccatttttta 720

                                                                       
Query: 64  aaaaatgacagtgcatatatacttagtcatcaaaataatggttttaaataatatttgacc 123
           ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 aaaaatgaca--gcatatatacttagtcatcaaaataatggttttaaataatatttgacc 662

                                                                       
Query: 124 ctgtggagatcatcataataattgaattaagtatcagattgtgtgttcagtggtgagccc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctgtggagatcatcataataattgaattaagtatcagattgtgtgttcagtggtgagccc 602

                                                                       
Query: 184 agtttctttgggaggaatgggtagggatagtagatgtcaagagaagagaccctaatttga 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agtttctttgggaggaatgggtagggatagtagatgtcaagagaagagaccctaatttga 542

                                                                       
Query: 244 ttttatgttatagcagcatag--aaaaagaggcccaaaacaggacaaaatattaaattgt 301
           |||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||| 
Sbjct: 541 ttttatgttatagcagcatagaaaaaaaaaggcccaaaacaggacaaaatattaaattg- 483

                                                                       
Query: 302 tttttttcaatttgatgagagcatgagtgatttatatttttcccacatttcacttgttca 361
            |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gttttttcaatatgatgagagcatgagtgatttatatttttcccacatttcacttgttca 423

                                                                       
Query: 362 tgttttgcaatgatattttattaaataccatatatcatagaatttctatattcttgcctc 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgttttgcaatgatattttattaaataccatatatcatagaatttctatattcttgcctc 363

                                                                       
Query: 422 tcatctttacagattttgttggacatgttttagtttcctcttcttttcaaagctactgta 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tcatctttacagattttgttggacatgttttagtttcctcttcttttcaaagctactgta 303

                                                                       
Query: 482 atttcacttcctcaggatcttcacccacacacaatctgctgggattttcttgtacctaac 541
           |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 302 atttcacttcctcaggatcttcacccacacacaatctgttgggtttttcttgtacctaac 243

                                                                       
Query: 542 ttgcttttttgtgtatagaccggtcccaaggttgtgctt-tgtgtgtgtgtgtgtgtgtg 600
           ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 242 ttgcttttttgtgtacagaccggtcccaaggttgtgcttgtgtgtgtgtgtgtgtgtgtg 183

                             
Query: 601 tgtgtgtgtgtgtgtgtg 618
           ||||||||||||||||||
Sbjct: 182 tgtgtgtgtgtgtgtgtg 165


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 62
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1018
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1008
Effective search space:   613872
Effective search space used:   613872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)