Query= MSMg01no536_i15.b1 MSMg01no536_i15.b1 CHROMAT_FILE:
MSMg01no536_i15.b1 PHD_FILE: MSMg01no536_i15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:40 2005
(555 letters)
>mm_chr10_89016518_89017472
Length = 955
Score = 971 bits (502), Expect = 0.0
Identities = 538/550 (97%)
Strand = Plus / Plus
Query: 6 gaattctatgcttttcgctgcctgactcttctagagcctgtgaagaactgaggagacatg 65
|||||||||||| | ||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 206 gaattctatgctgtaggctgcctgactcttccagagcttgtgaagaactgaggagacatg 265
Query: 66 aacactcctacagttaagtctgattcaacactgagttagaggagggacaccactgaaagc 125
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aacacgcctacagttaagtctgattcaacactgagttagaggagggacaccactgaaagc 325
Query: 126 tgaggtgtagctgtgagagcgtatgcaacaggaagaaaactacagcagcgctgctgtggt 185
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgaggtgtagctgtgagagcgtacgcaacaggaagaaaactacagcagcgctgctgtggt 385
Query: 186 tagtctaactggttatgcccaggagaggtgttctatggcgcttgggagtgagacgtgaca 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tagtctaactggttatgcccaggagaggtgttctatggcgcttgggagtgagacgtgaca 445
Query: 246 aggtcaagggcagctgatcttgggtggccttgggcatccagatggcgtgaaaggcaaatg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aggtcaagggcagctgatcttgggtggccttgggcatccagatggcgtgaaaggcaaatg 505
Query: 306 caccgtgagaacccatacacaggactccgtatcaccagaggaaagacggacactagcttc 365
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 506 cgccgtgagaacccatacacaggactccgtatcaccagaggaaagatggacactagcttc 565
Query: 366 ccacttacatcaaacaagtacagtatcagaaatacacgttggttaaaaccctgctaacac 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ccacttacatcaaacaagtacagtatcagaaatacacgttggttaaaaccctgctaacac 625
Query: 426 agcacggacagaaacacctcactgtcactcctacaagtacacactccattacaactttag 485
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 agcatggacagaaatacctcactgtcactcctacaagtacacactccattacaactttag 685
Query: 486 ttcttaaaacaaacagaaaagttactaaaaacacctatgccatagagatgtattccaaag 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 686 ttcttaaaacaaacagaaaagttactaaaaacacctatgccatagagatgtattcaaaag 745
Query: 546 tctatacacc 555
||||||||||
Sbjct: 746 tctatacacc 755
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no536_i15.g1 MSMg01no536_i15.g1 CHROMAT_FILE:
MSMg01no536_i15.g1 PHD_FILE: MSMg01no536_i15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:41 2005
(482 letters)
>mm_chr4_45164897_45165778
Length = 882
Score = 874 bits (452), Expect = 0.0
Identities = 473/482 (98%), Gaps = 4/482 (0%)
Strand = Plus / Minus
Query: 1 actctgtaaactgggctggtctcgaactcagagatctgcctgcctctatctcctgagagc 60
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 513 actctgtagactgggctggtctcgaactcagagatctgcctgcctctgcctcctgagagc 454
Query: 61 tggagttaaagttgagtgtcaccacctcccagatatctgtgttgctgttttaagacaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tggagttaaagttgagtgtcaccacctcccagatatctgtgttgctgttttaagacaaga 394
Query: 121 gttctctgtgatctcaaagtttccaggcctcagcctcccaatgactgacaacaccaggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 393 gttctctgtgatctcaaagtttccaggcctcagcctcccaatgactgacaataccaggtg 334
Query: 181 tgtcatcatgatcggctatgagtgatttttatatgcaatttgacttttatattttacaat 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 333 tgtcatcatgatcggctatgagtgatttttatatgcaattttacttttatattttacaat 274
Query: 241 taaaaaaaaaaagaccaaccaaccaaccaaccaatccaaaaaagagtttgtgagttaaca 300
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 taaaaaaaaaaag----accaaccaaccaaccaatccaaaaaagagtttgtgagttaaca 218
Query: 301 gaaatatctaaggaggaattgggttttatgtcaaatacaggaccgtgtgacctgccacct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gaaatatctaaggaggaattgggttttatgtcaaatacaggaccgtgtgacctgccacct 158
Query: 361 ctgtcttccctagacaacacacaaactccactttgaacattaaatatttataatgtggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ctgtcttccctagacaacacacaaactccactttgaacattaaatatttataatgtggtt 98
Query: 421 tcactttagagaggacaggtagagaaatcttgagtgctttctttaaagttggtcaaaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 tcactttagagaggacaggtagagaaatcttgagtgctttctttaaagttggtcaaaaag 38
Query: 481 ca 482
||
Sbjct: 37 ca 36
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space: 411584
Effective search space used: 411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
