Query= MSMg01no537_b05.b1 MSMg01no537_b05.b1 CHROMAT_FILE:
MSMg01no537_b05.b1 PHD_FILE: MSMg01no537_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:21 2005
(644 letters)
>mm_chr10_84272525_84273564
Length = 1040
Score = 1131 bits (585), Expect = 0.0
Identities = 621/638 (97%), Gaps = 9/638 (1%)
Strand = Plus / Plus
Query: 12 caatctgatcgatgggtgtaatgcctaccttgtgtgttgtgtttgttttgtttttgcttt 71
|||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 207 caatctgaacgatgggtgtaatgcctatcttgtgtgttgtgtttgttttgtttttgcttt 266
Query: 72 g-----ctttactttgctgtgcttcatttgggctttgctgttgttgacctgggtgctcaa 126
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gctttactttactttgctgtgcttcatttgggctttgctgttgttgacctgggtgctcaa 326
Query: 127 ctatgtagctcaggctatccctggacatactacatagcctaagctcactgcaaacccaga 186
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 327 ctatgtagctcaggctatccctggatacactacatagcctaagctcactgcaaacccaga 386
Query: 187 tcctcccacttcacccttctgagtgctaggattgcaggcatgtgttgacacgcctggctt 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tcctcccacttcacccttctgagtgctaggattgcaggcatgtgttgacacgcctggctt 446
Query: 247 ttacgtgactctcatgagaatgaagtaaaatcttacctggctacccagggcctggcacct 306
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 447 ttacgtgactctcatgagaatgaagtaaaa----gcctggatacccagggcctggcacct 502
Query: 307 aggacaagttccatgaatgtgagctgttgtttgctgttacaaaatttcagtcccaagtcc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aggacaagttccatgaatgtgagctgttgtttgctgttacaaaatttcagtcccaagtcc 562
Query: 367 tctgtgaaaccataactattcactcccatctacacacccgtctgtttccctcttcaatag 426
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 563 tctgtgaaaccataactattcactcccatctacacacccatctgtttccctcttcaatag 622
Query: 427 cctctacggtcaggagtttatagtatttaaatattattgtttcttgtatgtcactctccc 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 cctctacggtcaggagtttatagtatttaaatattattgtttcttgtatgtcactctccc 682
Query: 487 caaatagactccaaagtgaactaggacataggtcatgtcttatgccaacacaagtgccca 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 caaatagactccaaagtgaactaggacataggtcatgtcttatgccaacacaagtgccca 742
Query: 547 caggagccagganaggaacagaaaatagtcttggtgtaagaaaaatggggaggggtgagg 606
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 caggagccaggaaaggaacagaaaatagtcttggtgtaagaaaaatggggaggggtgagg 802
Query: 607 actcgggccaacccccaggcactgctcaccctggccaa 644
||||||||||||||||||||||||||||||||||||||
Sbjct: 803 actcgggccaacccccaggcactgctcaccctggccaa 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1040
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1030
Effective search space: 653020
Effective search space used: 653020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_b05.g1 MSMg01no537_b05.g1 CHROMAT_FILE:
MSMg01no537_b05.g1 PHD_FILE: MSMg01no537_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:21 2005
(591 letters)
>mm_chr10_84421787_84422777
Length = 991
Score = 1079 bits (558), Expect = 0.0
Identities = 567/570 (99%)
Strand = Plus / Minus
Query: 1 actttgtagaccaggctggccttgaactcagagagacacttacttgtctctgcctcccga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 actttgtagaccaggctggccttgaactcagagagacacttacttgtctctgcctcccga 511
Query: 61 gtgctgggattaaaggcgtgagccacctggactggccaccagagcacatacagagggagg 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 510 gtgctgggattaaaggcgtgagccacctggactggccaccagagcccatacagagggagg 451
Query: 121 tggagtgcagtaattctttgtattcttataagtactaggagacttctaatgaagtcaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tggagtgcagtaattctttgtattcttataagtactaggagacttctaatgaagtcaaat 391
Query: 181 gctttgttattacaaacctaatccacagcaagtaagagaactggaaactgtatcaactcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gctttgttattacaaacctaatccacagcaagtaagagaactggaaactgtatcaactcc 331
Query: 241 tgctcaactgttttctgacaatggtaatttgtattttcagtgctgggaactaaatcccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tgctcaactgttttctgacaatggtaatttgtattttcagtgctgggaactaaatcccag 271
Query: 301 gacttgtgcacagtagacacacactttactgagctgttcatccctagctccagacaacac 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 270 gacttgtgcacagtagacacacactttactgagctgttcgtccctagctccagacaacac 211
Query: 361 tccattaatgtctttaacagacaagttatataactgcaattatctttattttatatgtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 tccattaatgtctttaacagacaagttatataactgcaattatctttattttatatgtat 151
Query: 421 ctattactttgtggggggaggtatgtgcatactggtgtgtgagtgaatgtggctgttcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 ctattactttgtggggggaggtatgtgcatactggtgtgtgagtgaatgtggctgttcac 91
Query: 481 ataaagaggtcagaaaacagggtcagggggttggagagatggctcagtggtttagagcac 540
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 90 ataaagaggtcagaaaacagggtcagggggctggagagatggctcagtggtttagagcac 31
Query: 541 tgactgctcttccagaggtcctgagttcaa 570
||||||||||||||||||||||||||||||
Sbjct: 30 tgactgctcttccagaggtcctgagttcaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
