Query= MSMg01no539_m07.b1 MSMg01no539_m07.b1 CHROMAT_FILE:
MSMg01no539_m07.b1 PHD_FILE: MSMg01no539_m07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:50 2005
(487 letters)
>mm_chr10_125686594_125687480
Length = 887
Score = 559 bits (289), Expect = e-163
Identities = 329/353 (93%), Gaps = 18/353 (5%)
Strand = Plus / Plus
Query: 153 cttagtgttgacttccggcctctacctgcacatacacatatacagacatacacacacaca 212
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 cttaatgttgacttccggcctctacctgcacatacacatatacagacatacacacacaca 394
Query: 213 gatacacacacatatacaatatacacatgaatatg--cacacacatacatacatacacaa 270
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 395 gatacacacacatatacaatatacacatgaatatgcacacacacatacatacatacacaa 454
Query: 271 atatatatgtatatacaatacacagatgactatgcat----------------acacaca 314
||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 455 atatatatgtatatacaatacacagatgactatgcatacacacacacacacacacacaca 514
Query: 315 cacacacacagacacaccaagttatatgctaacagcaaactcctctactgagttactatg 374
|||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 515 cacacacacacacacaccaagttctctgctaacagcaaactcctctactgagttactatg 574
Query: 375 tatgtgagaaatgcatgtgtaacatgtcaagacaatgaccattagttggcagttgatttt 434
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 575 tatgtgagaaatgcatgtgtaacatgtcaagacaatgactattagttggcagttgatttt 634
Query: 435 gtccatcaatattagcctagctgatgttatactatcttatacgttcctggcta 487
|||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 635 gtccatcaatattagcctagctgatgttatactatcttgtacgttcctggcta 687
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no539_m07.g1 MSMg01no539_m07.g1 CHROMAT_FILE:
MSMg01no539_m07.g1 PHD_FILE: MSMg01no539_m07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:50 2005
(505 letters)
>mm_chr10_125883293_125884197
Length = 905
Score = 946 bits (489), Expect = 0.0
Identities = 501/505 (99%)
Strand = Plus / Minus
Query: 1 agtgctggggtagtgcacaggaggatcactctatctcaaaaaataaatgaatgtgacaga 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 agtgctggggtagtggacaggaggatcactctatctcaaaaaataaatgaatgtgacaga 646
Query: 61 attcatccatggtcactgtcctgcctgcacatgcatctgcatgtatatctgcacttgtgt 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 645 attcatccatggtcactgtcctgcctgcacatgcatctgcatgcatatctgcacttgtgt 586
Query: 121 acatacatgcaaaatgaacatacactaacatgtgggactgtgcattagagggatgcatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 acatacatgcaaaatgaacatacactaacatgtgggactgtgcattagagggatgcatgt 526
Query: 181 gtagacttatgaaataaaggccaattattttcttttggcaaggtaccagctctgtagtag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gtagacttatgaaataaaggccaattattttcttttggcaaggtaccagctctgtagtag 466
Query: 241 atgactttatgagcctgtttatctacatcctataggtccttattttgggatttgttaaat 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 465 atgactttatgagcctgtttatctatatcctataggtccttattttgggatttgttaaat 406
Query: 301 tctgtcaatccaggaactgtccagagtcccacaatatgatggaagtgtaccgtttctctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 405 tctgtcaatccaggaactgtccagagtcccacaatatgatggaagtgtaccatttctctg 346
Query: 361 caattcccaatgaagctgaacaccccttagatgtctctggtctctgctttttaaaatctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 caattcccaatgaagctgaacaccccttagatgtctctggtctctgctttttaaaatctt 286
Query: 421 gaaaagcccattcaggccctttgcttggctttaaaccatttaattggttgagaggatttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 gaaaagcccattcaggccctttgcttggctttaaaccatttaattggttgagaggatttt 226
Query: 481 attttacatcctgggcttaaactca 505
|||||||||||||||||||||||||
Sbjct: 225 attttacatcctgggcttaaactca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
